LOCUS BC109312 3245 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens myosin VIIA and Rab interacting protein, mRNA (cDNA
clone MGC:130035 IMAGE:40036097), complete cds.
ACCESSION BC109312
VERSION BC109312.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: o Column: 16.
FEATURES Location/Qualifiers
source 1..3245
/db_xref="H-InvDB:HIT000339407"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:130035 IMAGE:40036097"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CGCACAA sequenced from
the forward primer"
gene 1..3245
/gene="MYRIP"
/gene_synonym="DKFZp586F1018"
/gene_synonym="SLAC2-C"
/gene_synonym="SLAC2C"
/db_xref="GeneID:25924"
/db_xref="HGNC:HGNC:19156"
CDS 116..2029
/gene="MYRIP"
/gene_synonym="DKFZp586F1018"
/gene_synonym="SLAC2-C"
/gene_synonym="SLAC2C"
/codon_start=1
/product="MYRIP protein"
/protein_id="AAI09313.1"
/db_xref="GeneID:25924"
/db_xref="HGNC:HGNC:19156"
/translation="MGRKLDLSGLTDDETEHVLQVVQRDFNLRKKEEERLSELKQKLD
EEGSKCSILSKHQQFVEHCCMRCCSPFTFLVNTKRQCGDCKFNVCKSCCSYQKHEKAW
VCCVCQQARLLRAQSLEWFYNNVKSRFKRFGSAKVLKNLYRKHRLESGACFDILGGSL
FESNLENEGSISGSDSTFYRQSEGHSVMDTLAVALRVAEEAIEEAISKAEAYGDSLDK
QNEASYLRDHKEELTEELATTILQKIIRKQKSKSEQQVEEEPGWPHPQSCSTKVADEG
TSASPGGYRAPAALWRSQSAFSITGEEALKTPPVEAPSRQPRDQGQHPRAESALPSWK
SVDRLDETNLAPVLQSPDGNWVALKDGAPPPTRLLAKPKSGTFQALEVASSVASAYDE
MGSDSEEDFDWSEALSKLCPRSRALPRNPQPQPTQAQSSDQGPIAASPSSALSPNPEA
MCSDSETSSAGSSREVGHQARLSWLQRKAPRNPAAEKMRLHGELDVNFNPQLASRETS
DSSEPEEAPHTTDRRARRWRRARLGSEEPSKEPSSPSAQLRDLDTHQVSDDLSETDIS
NEARDPQTLTDTTEEKRRNRLYELAMKMSEKETSSGEDQESEPKTESENQKESLSSED
NSQSVQEELKKKS"
BASE COUNT 869 a 869 c 887 g 620 t
ORIGIN
1 cctgggcgta ctgaggcgcg gtggcctgag cccggccgcc atcgatgacc ccggtcgcgg
61 acttgcttca ggctggccac cccccgtctt gtttcatcat ctgtgttgag taaccatggg
121 gaggaagctg gacctgtctg gtttgactga tgatgaaaca gagcatgttc ttcaggtggt
181 tcaaagagac ttcaatcttc gcaaaaaaga agaagaacga ctaagtgagc tgaagcagaa
241 gctggatgag gaaggcagca agtgcagcat cctctcgaag caccagcagt ttgtggagca
301 ctgctgcatg cgctgctgct cgcccttcac cttcctcgtc aacaccaagc gccagtgtgg
361 agattgcaaa ttcaatgtct gcaagagctg ctgctcctac cagaagcacg aaaaggcctg
421 ggtctgctgc gtctgccagc aagcgaggct tctgagggcc caatctctgg aatggttcta
481 caataatgtg aagagccgct tcaagcgctt tggcagtgcc aaggttctga agaacctgta
541 caggaagcac cggctggaga gtggcgcgtg cttcgacatt ctaggaggaa gcctttttga
601 gtcaaacctg gagaatgaag gaagcatttc tggcagtgat tcaacatttt ataggcagtc
661 agaaggacat agtgtgatgg acaccttggc tgtggcccta cgggtggctg aagaggccat
721 tgaggaagca atttccaaag cagaggcata tggggacagc ctggacaagc aaaatgaggc
781 cagttacctg cgggaccaca aggaggagct aactgaggaa ctggccacga caatcctgca
841 gaagattata cgaaaacaga agagcaaaag tgagcagcaa gtggaagaag agccaggatg
901 gccacatccc cagagttgca gcacaaaggt ggcagatgag gggacctcag catcccctgg
961 aggctaccgt gctcccgctg ccctctggag gtcccagtct gccttctcaa tcactggaga
1021 agaagccctg aagacccctc cagtggaggc tccatcgagg cagccaaggg accaaggcca
1081 acacccgaga gcagagtctg ctctgcccag ctggaagagt gtggacaggc tggatgaaac
1141 aaacctggcc ccagttttgc agagccccga cgggaactgg gtggccctga aggatggcgc
1201 tccacccccc acccgactac tggccaaacc taagagcggg acgtttcagg ccctggaggt
1261 ggcctccagt gtggcatctg cctacgatga gatgggctcc gatagcgagg aagactttga
1321 ctggagtgag gccttgagca agctgtgtcc caggtcccgg gccctgccca ggaaccccca
1381 gcctcagccc acacaggccc agagctctga ccaaggcccc atagctgcct ccccatcctc
1441 tgcactctcc cccaaccctg aggccatgtg ctctgactcg gagacctcct ccgcaggctc
1501 ttcccgagaa gttgggcacc aggccagact gtcctggttg cagaggaagg cccccaggaa
1561 ccctgcagct gagaagatgc gcttgcatgg agagctggac gtgaacttca acccccagtt
1621 ggccagcagg gagacctcgg acagcagcga gccggaggag gccccccaca ccacagaccg
1681 gcgggccagg aggtggagaa gagcccgatt gggctcagaa gagccaagca aagaaccatc
1741 ttcccccagc gcccagctcc gggatctaga cacacatcag gtgtcggatg atttatcaga
1801 gacagacatc agcaatgagg ctcgggaccc ccagactctc acagacacca cagaggagaa
1861 acggagaaac aggctgtacg agttagcaat gaaaatgagt gaaaaggaga cttcttcagg
1921 ggaggatcag gagtctgagc ccaagacaga atctgagaac cagaaggaaa gtctgtcctc
1981 tgaagacaac agccagagtg tccaggaaga gctgaagaag aagtcctgaa agtcatcaat
2041 gccacagagg agttgatagc aggatctaca gggccctggg agtccccaca agtccctcct
2101 gacagacaga aggggatgtt tcctcgtggg acagaccaag tgagactgga tgagcagctg
2161 acttccctgg aagaaaatgt atacctggca gcaggcactg tgtatggact ggagacccag
2221 ctgactgagc tagaagatgc cgcccgctgc atccacagtg gcactgatga gacccatctg
2281 gcggatctgg aggaccaggt ggccacggct gcagcccaag tccaccatgc tgaactccag
2341 atttcagata ttgagagccg gatttcagcc ctgaccattg caggattaaa catagcacca
2401 tgtgtgcgct tcacaagaag acgggatcag aagcaaagga cccaggtaca aaccatagat
2461 acatcaaggc agcaaaggag gaaactgcct gctccaccgg tgaaagctga aaaaattgag
2521 acatcttcag tgactaccat taaaacattt aaccacaact tcattctcca aggctcctca
2581 acaaacagga ctaaggaaag gaaaggcacc accaaggatt tgatggagcc tgctctggag
2641 tcagctgtga tgtactgaca ccatggaatt ccactgccag tgacccactg cctccggccg
2701 tacacgacag tgccttgacc caacagccat cgagtactgt atgtatttcc acctgaggag
2761 aaggcctggg gaggccacag tgcaccattg cacagggctg tcctgatacc tcatccagaa
2821 agccgtctca gacttcagca ctgcggtctt gcccactctc tgccttaggc tcccagggga
2881 atccaagaca gaaaatgaag acactggctt ccaacagcag cgctccatgt ttaagataca
2941 tattttccct gtttgctttg ctactgtatg ttgactttaa gatctttttt taaatacatt
3001 tgattcagct agtattccat gtcaacaatt tgtccaaagg aaaactgctg gagggaggtg
3061 gagggaggaa ggtgggaatt attatttaat acatcattaa tgcttattaa tctctcacaa
3121 gcatctttgt cttgcaaatc ctaagggaaa agcaagtccc tgcagtgagc actagggaca
3181 gtctaatttg gggattgctc aaccatcaag actgcaggtc tcccttcagc cacctccttc
3241 ctgca
//