LOCUS BC109311 3145 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens myosin VIIA and Rab interacting protein, mRNA (cDNA
clone MGC:130034 IMAGE:40036096), complete cds.
ACCESSION BC109311
VERSION BC109311.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3145)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3145)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: o Column: 15.
FEATURES Location/Qualifiers
source 1..3145
/db_xref="H-InvDB:HIT000339406"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:130034 IMAGE:40036096"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AACTCTT sequenced from
the reverse primer"
gene 1..3145
/gene="MYRIP"
/gene_synonym="DKFZp586F1018"
/gene_synonym="SLAC2-C"
/gene_synonym="SLAC2C"
/db_xref="GeneID:25924"
/db_xref="HGNC:HGNC:19156"
CDS 246..2558
/gene="MYRIP"
/gene_synonym="DKFZp586F1018"
/gene_synonym="SLAC2-C"
/gene_synonym="SLAC2C"
/codon_start=1
/product="MYRIP protein"
/protein_id="AAI09312.1"
/db_xref="GeneID:25924"
/db_xref="HGNC:HGNC:19156"
/translation="MRKAASAASSRSTSSLWSTAACAAARPSPSSSTPSASVEIANSM
SARAAAPTRSTKRPGSAASASKRGGSLFESNLENEGSISGSDSTFYRQSEGHSVMDTL
AVALRVAEEAIEEAISKAEAYGDSLDKQNEASYLRDHKEELTEELATTILQKIIRKQK
SKSEQQVEEEPGWPHPQSCSTKVADEGTSASPGGYRAPAALWRSQSAFSITGEEALKT
PPVEAPSRQPRDQGQHPRAESALPSWKSVDRLDETNLAPVLQSPDGNWVALKDGAPPP
TRLLAKPKSGTFQALEVASSVASAYDEMGSDSEEDFDWSEALSKLCPRSRALPRNPQP
QPTQAQSSDQGPIAASPSSALSPNPEAMCSDSETSSAGSSREVGHQARLSWLQRKAPR
NPAAEKMRLHGELDVNFNPQLASRETSDSSEPEEAPHTTDRRARRWRRARLGSEEPSK
EPSSPSAQLRDLDTHQVSDDLSETDISNEARDPQTLTDTTEEKRRNRLYELAMKMSEK
ETSSGEDQESEPKTESENQKESLSSEDNSQSVQEELKKKFSAVSLCNISTEVLKVINA
TEELIAGSTGPWESPQVPPDRQKGMFPRGTDQVRLDEQLTSLEENVYLAAGTVYGLET
QLTELEDAARCIHSGTDETHLADLEDQVATAAAQVHHAELQISDIESRISALTIAGLN
IAPCVRFTRRRDQKQRTQVQTIDTSRQQRRKLPAPPVKAEKIETSSVTTIKTFNHNFI
LQGSSTNRTKERKGTTKDLMEPALESAVMY"
BASE COUNT 844 a 848 c 851 g 602 t
ORIGIN
1 cctgggcgta ctgaggcgcg gtggcctgag cccggccgcc atcgatgacc ccggtcgcgg
61 acttgcttca ggctggccac cccccgtctt gtttcatcat ctgtgttgag taaccatggg
121 gaggaagctg gacctgtctg gtttgactga tgatgaaaca gagcatgttc ttcaggtggt
181 tcaaagagac ttcaatcttc gcaaaaaaga agaagaacga ctaagtgagc tgaagcagaa
241 gctggatgag gaaggcagca agtgcagcat cctctcgaag caccagcagt ttgtggagca
301 ctgctgcatg cgctgctgct cgcccttcac cttcctcgtc aacaccaagc gccagtgtgg
361 agattgcaaa ttcaatgtct gcaagagctg ctgctcctac cagaagcacg aaaaggcctg
421 ggtctgctgc gtctgccagc aagcgaggag gaagcctttt tgagtcaaac ctggagaatg
481 aaggaagcat ttctggcagt gattcaacat tttataggca gtcagaagga catagtgtga
541 tggacacctt ggctgtggcc ctacgggtgg ctgaagaggc cattgaggaa gcaatttcca
601 aagcagaggc atatggggac agcctggaca agcaaaatga ggccagttac ctgcgggacc
661 acaaggagga gctaactgag gaactggcca cgacaatcct gcagaagatt atacgaaaac
721 agaagagcaa aagtgagcag caagtggaag aagagccagg atggccacat ccccagagtt
781 gcagcacaaa ggtggcagat gaggggacct cagcatcccc tggaggctac cgtgctcccg
841 ctgccctctg gaggtcccag tctgccttct caatcactgg agaagaagcc ctgaagaccc
901 ctccagtgga ggctccatcg aggcagccaa gggaccaagg ccaacacccg agagcagagt
961 ctgctctgcc cagctggaag agtgtggaca ggctggatga aacaaacctg gccccagttt
1021 tgcagagccc cgacgggaac tgggtggccc tgaaggatgg cgctccaccc cccacccgac
1081 tactggccaa acctaagagc gggacgtttc aggccctgga ggtggcctcc agtgtggcat
1141 ctgcctacga tgagatgggc tccgatagcg aggaagactt tgactggagt gaggccttga
1201 gcaagctgtg tcccaggtcc cgggccctgc ccaggaaccc ccagcctcag cccacacagg
1261 cccagagctc tgaccaaggc cccatagctg cctccccatc ctctgcactc tcccccaacc
1321 ctgaggccat gtgctctgac tcggagacct cctccgcagg ctcttcccga gaagttgggc
1381 accaggccag actgtcctgg ttgcagagga aggcccccag gaaccctgca gctgagaaga
1441 tgcgcttgca tggagagctg gacgtgaact tcaaccccca gttggccagc agggagacct
1501 cggacagcag cgagccggag gaggcccccc acaccacaga ccggcgggcc aggaggtgga
1561 gaagagcccg attgggctca gaagagccaa gcaaagaacc atcttccccc agcgcccagc
1621 tccgggatct agacacacat caggtgtcgg atgatttatc agagacagac atcagcaatg
1681 aggctcggga tccccagact ctcacagaca ccacagagga gaaacggaga aacaggctgt
1741 acgagttagc aatgaaaatg agtgaaaagg agacttcttc aggggaggat caggagtctg
1801 agcccaagac agaatctgag aaccagaagg aaagtctgtc ctctgaagac aacagccaga
1861 gtgtccagga agagctgaag aagaagtttt ctgctgtttc tctctgcaac atctccacag
1921 aagtcctgaa agtcatcaat gccacagagg agttgatagc aggatctaca gggccctggg
1981 agtccccaca agtccctcct gacagacaga aggggatgtt tcctcgtggg acagaccaag
2041 tgagactgga tgagcagctg acttccctgg aagaaaatgt atacctggca gcaggcactg
2101 tgtatggact ggagacccag ctgactgagc tagaagatgc cgcccgctgc atccacagcg
2161 gcactgatga gacccatctg gcggatctgg aggaccaggt ggccacggct gcagcccaag
2221 tccaccatgc tgaactccag atttcagata ttgagagccg gatttcagcc ctgaccattg
2281 caggattaaa catagcacca tgtgtgcgct tcacaagaag acgggatcag aagcaaagga
2341 cccaggtaca aaccatagat acatcaaggc agcaaaggag gaaactgcct gctccaccgg
2401 tgaaagctga aaaaattgag acatcttcag tgactaccat taaaacattt aaccacaact
2461 tcattctcca aggctcctca acaaacagga ctaaggaaag gaaaggcacc accaaggatt
2521 tgatggagcc tgctctggag tcagctgtga tgtactgaca ccatggaatt ccactgccag
2581 tgacccactg cctccggccg tacacgacag tgccttgacc caacagccat cgagtactgt
2641 atgtatttcc acctgaggag aaggcctggg gaggccacag tgcaccattg cacagggctg
2701 tcctgatacc tcatccagaa agccgtctca gacttcagca ctgcggtctt gcccactctc
2761 tgccttaggc tcccagggga atccaagaca gaaaatgaag acactggctt ccaacagcag
2821 cgctccatgt ttaagataca tattttccct gtttgctttg ctactgtatg ttgactttaa
2881 gatctttttt taaatacatt tgattcagct agtattccat gtcaacaatt tgtccaaagg
2941 aaaactgctg gagggaggtg gagggaggaa ggtgggaatt attatttaat acatcattaa
3001 tgcttattaa tctctcacaa gcatctttgt cttgcaaatc ctaagggaaa agcaagtccc
3061 tgcagtgagc actagggaca gtctaatttg gggattgctc aaccatcaag actgcaggtc
3121 tcccttcagc cacctccttc ctgca
//