LOCUS       BC109278                2757 bp    mRNA    linear   HUM 12-JAN-2007
DEFINITION  Homo sapiens lin-54 homolog (C. elegans), mRNA (cDNA clone
            MGC:129905 IMAGE:40028371), complete cds.
ACCESSION   BC109278
VERSION     BC109278.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2757)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Sep 26, 2006 this sequence version replaced BC109278.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 13 Row: k Column: 8.
FEATURES             Location/Qualifiers
     source          1..2757
                     /db_xref="H-InvDB:HIT000339375"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:129905 IMAGE:40028371"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: CGACCC sequenced from
                     the forward primer"
     gene            1..2757
                     /gene="LIN54"
                     /gene_synonym="CXCDC1"
                     /gene_synonym="DKFZp686L1814"
                     /gene_synonym="JC8.6"
                     /gene_synonym="MIP120"
                     /db_xref="GeneID:132660"
                     /db_xref="HGNC:HGNC:25397"
     CDS             259..2241
                     /gene="LIN54"
                     /gene_synonym="CXCDC1"
                     /gene_synonym="DKFZp686L1814"
                     /gene_synonym="JC8.6"
                     /gene_synonym="MIP120"
                     /codon_start=1
                     /product="LIN54 protein"
                     /protein_id="AAI09279.1"
                     /db_xref="GeneID:132660"
                     /db_xref="HGNC:HGNC:25397"
                     /translation="MEVVPAEVNSLLPEEIMDTGITLVDDDSIEAVIVSSPIPMETEL
                     EEIVNINSTGDSTATPISTEPITVYSNHTNQVAVNTTITKADSNTTVKPAFPSGLQKL
                     GAQTPVTISANQIILNKVSQTSDLKLGNQTLKPDGQKLILTTLGKSGSPIVLALPHSQ
                     LPQAQKVTTQAQSGDAKLPPQQIKVVTIGGRPEVKPVIGVSALTPGSQLINTTTQPSV
                     LQTQQLKTVQAVKSTVQTITVGGVSTSQFKTIIPLATAPNVQQIQVPGSKFHYVRLVT
                     ATSASSSTQPVSQNPSTNTQPLQQAKPVVVNTTPVRMSVPIVSAQAVKQVVPKPINPT
                     SQIVTTSQPQQRLIMPATPLPQIQPNLTNLPPGTVLAPAPGTGNVGYAVLPAQYVTQL
                     QQSSYVSIASNSTFTGTSGIQTQARLPFNGIIPSESASRPRKPCNCTKSLCLKLYCDC
                     FANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRHSK
                     GCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQ
                     TAAKTKLSSQISDLLTRPTPALNSGGGKLPFTFVTKEVAEATCNCLLAQAEQADKKGK
                     SKAAAERMILEEFGRCLMSVINSAGKAKSDPCAMNC"
BASE COUNT          871 a          608 c          585 g          693 t
ORIGIN      
        1 cctgacatac cagaggcggc ggcgacggcg acgtcgccac cccggctccc ttctcggtcc
       61 ccgggtaccc tggagcgctc cagtttggac aaactgggaa aggaagctgc tggccagagc
      121 tatcgtgcac gggcaaaaca agccccgccg gggctcggga ttgcccagga ccttctggag
      181 cccctacctc ggagcccgag ggaggagaaa gcggcagccg ctggagtgcc tgatcaactt
      241 tctagcggga gaacgatcat ggaggtggtg ccagctgagg tgaatagttt gcttccagag
      301 gaaataatgg acactggtat aactttagtg gatgatgata gtattgaggc tgttattgtt
      361 tcatccccaa ttcccatgga gacagaactg gaagaaattg tcaacataaa ttctactggt
      421 gactctacag ccacgcccat ttccacggaa ccaatcacag tgtacagtaa ccacactaac
      481 caagttgcag tgaataccac aattactaaa gcagattcta ataccacagt gaaaccagct
      541 tttccaagtg gccttcaaaa acttggtgct cagactcctg tgactatatc agccaatcag
      601 attattttaa acaaagtatc acagacatct gatcttaaac ttggcaatca gacccttaaa
      661 ccagatggac agaagttaat tttaacaact ttgggcaagt ctggttcacc aattgtttta
      721 gcactacccc atagccaact accccaggct cagaaagtta caactcaggc ccagtcagga
      781 gatgctaagt taccaccgca gcaaattaaa gtagttacca ttggagggag gccagaggtg
      841 aaacctgtca ttggtgtctc agcattgacc ccaggaagtc aactgattaa tactacaact
      901 cagccctctg tgttacagac ccaacagtta aaaacagtac aggcagtgaa atcaactgtg
      961 cagaccatca ctgttggagg agtgagcaca tcacagttta agacaattat tcctctggca
     1021 actgctccca atgtccagca gattcaagtg cctggaagca agtttcatta tgtccgactt
     1081 gttactgcca catcagccag tagctcaacc cagccagtta gtcagaatcc cagtacaaac
     1141 actcagcctc ttcagcaagc aaagccagtg gttgttaata caaccccagt gcggatgtca
     1201 gttccaattg tctcagctca ggctgtcaaa caagttgttc caaaaccaat caatccaact
     1261 tcacaaatag taactactag ccagccacag caacggctta tcatgcctgc cacaccactg
     1321 ccacagatcc agcccaacct cactaacctg ccaccaggca ctgtcctggc accagctccg
     1381 ggaacaggga atgtgggtta tgcagtgctt ccagctcagt atgttactca gctacagcag
     1441 tcttcatatg tatcaatagc aagcaactct acctttactg gaacatctgg tatccagacc
     1501 caggcacggc ttccattcaa tggcataatc ccatcagagt cggccagtcg gccccgaaag
     1561 ccctgtaatt gtacaaaatc actgtgtttg aaattgtatt gtgattgctt tgcaaatggt
     1621 gaattttgca acaactgcaa ttgtactaat tgttacaaca atttggaaca tgaaaatgaa
     1681 aggcaaaaag caataaaggc atgccttgac agaaatccag aagcctttaa gcctaagata
     1741 gggaaaggaa aggagggaga atctgatcga cgtcatagca aagggtgtaa ttgcaaacga
     1801 tcaggatgtc ttaaaaacta ctgtgaatgc tatgaggcaa aaataatgtg ttcctcaata
     1861 tgcaaatgta ttggctgtaa gaattttgaa gaaagcccgg aaaggaagac attgatgcat
     1921 ttggcagatg cagctgaagt aagggtacag caacaaacag cagccaagac gaagttatcc
     1981 tctcaaattt cagacttgct tactaggcca acaccagctt taaatagtgg aggcggaaaa
     2041 ttgccattta catttgtaac taaggaagta gctgaagcca catgtaattg cctccttgcc
     2101 caggcagagc aggcagacaa gaagggaaaa tcaaaggcag cagcggaacg gatgatactt
     2161 gaggaattcg gacgatgttt gatgagtgtc atcaactctg caggaaaggc aaaaagtgac
     2221 ccttgtgcca tgaattgcta actcttgcac aaaagactga taaatggaac tgtacagaaa
     2281 atttaaggtg cagggacact tgattttctg gaagaaaaac aattactgta ttttaattca
     2341 gtccttgttt taaaagacct gaaattataa tactgaagga gaagaaattt taaatgagga
     2401 aattagtaca ttttaaatct tagttaaatc tgcttatgtc ccttctaaat tgaatttttc
     2461 tttattatat agatttttta atttgcttgg gtttcttaag aattagatgt tctctttctg
     2521 atacctttga caaaaaatgt ttataaattc atataattta taatgtatgg tgttgtatga
     2581 ctttgttaat agaaaagcca aagcagcagt ggttagcacc cattctttgg gacttgatct
     2641 agaatatctg cagacagaat gttacataaa caaattctta tgaaacacat tcaaatgaca
     2701 ttttgtattt agaaaaggac tatcttttaa agaaaaagca gccttttagg gccgatt
//