LOCUS       BC109240                 807 bp    mRNA    linear   HUM 23-JUL-2007
DEFINITION  Homo sapiens protocadherin gamma subfamily A, 6, mRNA (cDNA clone
            IMAGE:40015230), partial cds.
ACCESSION   BC109240
VERSION     BC109240.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 807)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 8 Row: o Column: 10.
FEATURES             Location/Qualifiers
     source          1..807
                     /db_xref="H-InvDB:HIT000386507"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40015230"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: TGAACAAA sequenced from
                     the forward primer"
     gene            <1..>807
                     /gene="PCDHGA6"
                     /gene_synonym="PCDH-GAMMA-A6"
                     /db_xref="GeneID:56109"
                     /db_xref="HGNC:HGNC:8704"
                     /db_xref="MIM:606293"
     CDS             <1..>807
                     /gene="PCDHGA6"
                     /gene_synonym="PCDH-GAMMA-A6"
                     /codon_start=2
                     /product="PCDHGA6 protein"
                     /protein_id="AAI09241.1"
                     /db_xref="GeneID:56109"
                     /db_xref="HGNC:HGNC:8704"
                     /db_xref="MIM:606293"
                     /translation="HTLTGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYED
                     SSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALF
                     QVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDK
                     GTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNA
                     QVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWETAHL"
BASE COUNT          219 a          212 c          178 g          198 t
ORIGIN      
        1 gcacacactg acaggagtcc acggggaagt aacttattcc tttgtgaaga ttacagaaaa
       61 gatctcacaa attttctgtt tgaatgtttt gactggagaa atttcaactt ctgcaaatct
      121 agactatgag gactcgagtt tttatgagct gggtgttgaa gcccgggatg ggccaggtct
      181 tcgagacaga gcgaaagtct taataactat cttggatgtc aatgataatg taccagaagt
      241 ggttgttaca tctggaagca gaacaattgc tgaaagtgca cctccaggaa cagtaatcgc
      301 cctttttcaa gtgttcgatc gagactctgg cctgaatggc ctggtaacct gttccatccc
      361 gagaagtctc ccatttgaat tggaaaaatc agttggcaat tattatcgat tagtgacaaa
      421 tgcagctcta gaccgggaag aggtattctt gtacaacatc actgtgacag ccacggacaa
      481 aggaacacca cctctgtcta cagaaacaat catctctcta aatgtggcag acaccaacga
      541 caacccgccc accttccccc attcatccta ctcagtctat gtccttgaaa acaaccccag
      601 gggtgcctcc atcttctctg tgaatgcact ggaccctgac gtggaccaga acgcccaagt
      661 ctcctactca ctggcagaag acaccctcca gggggcgccc ctgtcctcct acgtgtccat
      721 caactccgac actgggattc tgtacgccct gcgctccttc gactatgagc agttgagaga
      781 cctacagctg tgggagacag cccacct
//