LOCUS BC109233 3039 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens ALS2 C-terminal like, mRNA (cDNA clone
IMAGE:40011962), complete cds.
ACCESSION BC109233
VERSION BC109233.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3039)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3039)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: l Column: 9
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3039
/db_xref="H-InvDB:HIT000339338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40011962"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: ACTCTTAA sequenced from
the reverse primer"
gene 1..3039
/gene="ALS2CL"
/gene_synonym="RN49018"
/db_xref="GeneID:259173"
/db_xref="HGNC:HGNC:20605"
CDS 838..1410
/gene="ALS2CL"
/gene_synonym="RN49018"
/codon_start=1
/product="ALS2CL protein"
/protein_id="AAI09234.1"
/db_xref="GeneID:259173"
/db_xref="HGNC:HGNC:20605"
/translation="MLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDTQLLEFLD
VQKHLWPLKDLTLTSNQRYSLVRDKCFLSATECLQKIMTTVDPREKLEVLERTYGEIE
GTVSRVLGREYKLPMDDLLPLLIYVVSRARIQHLGAEIHLIRDMMDPNHTGGLYDFLL
TALESCYEHIQKEDMRLHRLPGHWHSRELW"
BASE COUNT 620 a 854 c 921 g 644 t
ORIGIN
1 cctggagccg tggaggcagc tgggcgtggg tgccttcccc gtggaaagcc gctggcaggg
61 agtctacagc cccttccggg actttgtgtg tgctggctgc cccagggacc tgcaggaggc
121 cctgctgggc ttcgacgtgc agagctccag ggagctgcgt aggtctcagg attacctgtc
181 ctgcgagagg acccaccctg aggacagtgt gggcagtatg gaagacatcc tggaggagct
241 gctgcagcac cgggagccca aggccctgca gctgtacctc aggaaggctc tgagcaactc
301 actgcacccc ctgggaaagc tgctccggac actgatgctg accttccagg ctacctacgc
361 aggtgtcggg gccaacaagc acctgcagga gctggcccag gaggaggtga agcagcatgc
421 ccaggaactc tgggctgcct acaggctgag cttggccctg gactcggaac acacctgcag
481 tcccaggctg ggctgtgacc ccatgaaaca ctgcaaatag aagccttaga tgctatagtt
541 ccttctgctg ctggattctc aggctaacat cctggagctc caaccttcta acttctgtgg
601 tttgagagga tgaaccctgc aggccatgtc cacagttctg agaggccacc tgcttttgcc
661 tttgttgact ggtggtagaa ctccagttct gtggcaaggg gcagccacac catttctctc
721 tcattgactc acaggggtct gctgcgagtt gccttagagc gcaagggcca ggccctggag
781 gaggatgaag acacagagac aagggacctc caggtgcatg gattggtgct gcccctcatg
841 ctgcccagct tctactcaga gctcttcacg ctctacctgc tgcttcatga gcgggaggac
901 agcttctaca gccagggcat tgccaacttg agcctctttc ctgataccca actgctcgag
961 ttcctggatg tgcagaagca cttgtggccc ctcaaggacc tcacgctgac gagcaatcag
1021 aggtactccc tggtcaggga caagtgtttc ctgtcagcca ccgagtgcct gcagaagatc
1081 atgaccacgg tggacccacg ggagaagctg gaggtgctgg agaggacata cggggaaatt
1141 gagggcaccg tgtcgagggt attgggccgg gagtacaagc tgcccatgga cgacctgctg
1201 ccacttctca tctacgtggt gtcgcgcgcc cgaattcagc acctgggagc cgagatccac
1261 ctgatccgtg acatgatgga ccccaaccac acaggaggcc tgtatgactt cctgctcaca
1321 gccctggagt cctgttacga gcacatccag aaagaagaca tgaggctgca ccgcttacct
1381 ggccactggc actccaggga gctctggtag cctggccttt cctggacaga ctgaagagct
1441 gagcagggca ctgccagcct gtccctcatt acccaaggca aggggcagga caggccctca
1501 gaagcagctc ttggaggaga tgagcatttt gttttgcaca ggaagatgct gctgctgccc
1561 tgactgggat gagggtgagg ggtgacgggt gtggccctgg atgtggtggt tttcccttgg
1621 ccactagccc atcttcaatg accccttaat ctgcagcagc tcacaggctg ggggtgagga
1681 gtccctggct tctcttagcc tgagcctttc tcccaagttc cagagcctct ccgggcctca
1741 gtgctgccat ctgtacaatg gtggagtgag tacgctgtaa aggaccttcc attcattttg
1801 ctgaattcca gagtcctttt ggaaaactga ctttagtctg ctgggctgta ttgacctctg
1861 gcaggctcga agcctcactg ggtatgcagt caacaggatg ggcctggaga tccgtgaact
1921 gcaggccacg tacccatgac gtaaacggcg gcactggagc aagctggggc ggggggtggg
1981 taaaccctca ctgccagcag gccccaagtg gcttgtaaat cattctcctg tgatgtctgt
2041 gggcctgcgt ggggacaaca ggggcacatg acatctgcct gggccctgac caataaaccc
2101 tcagacccag gacccaggac cctgctgtag ttggggagca ggagtacctt tgggagggga
2161 ggactttatt taaacagtgg ttctagtgtg ggaccaagag aggcaggagc tgggtcttgg
2221 ggcagcttta ttcctgttgg gcctcagttt ctcttcccca cacagtttat cttccgtcac
2281 attgtgccgg gtgacgtgca cggtctccct ctgccctagc cggagatgca tgatgacagg
2341 cagtgtgatg tgttctgaaa gtgtccaggg caaagcgtag ggagagggtg gatttgtgca
2401 gggtgcagct ctggagaaga agctggatca ctcttggtcc cattccctag gccctgagca
2461 agtcaggctc ctggctctgg gtgtggctcc cccaaacgaa gtactgactt cagcctgtga
2521 ggggagggtt gagggaggct ctggaaagcc cagccacacc tgagtccctg gcagtagcct
2581 tggggcagag ggcacccgca gagtcccaga gatgatgtgg gcagtgggca gagagagcct
2641 tggcgcctct gtttgccacc acttccccag gaaggaggga cagcatttct ctggctggtt
2701 ccactaaatg tgccagccca aatgcagggc atgggctctg gttctgccgg gagcctgtga
2761 cacccccagg aagggggtgg aactgaggaa gagcgaggat atgcaggcac tcatgcttac
2821 cgggactggg gcagctcact aggattctat cctttccaat cggcatcagc cagctcttgt
2881 cccctgataa gtgaggacag cctgaccctg gcctcaaatg cagccatccc tgagttcatg
2941 cgatgctgac gggaccccag cacacttccc tgcctccttt gagatctgcg agcccttgct
3001 gcagttcaga ttcaacaagg ccctctgccc accctctca
//