LOCUS BC109231 2248 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens SH3 and cysteine rich domain 2, mRNA (cDNA clone
MGC:129694 IMAGE:40011675), complete cds.
ACCESSION BC109231
VERSION BC109231.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2248)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2248)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 26, 2006 this sequence version replaced BC109231.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: l Column: 4.
FEATURES Location/Qualifiers
source 1..2248
/db_xref="H-InvDB:HIT000339336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129694 IMAGE:40011675"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TAAAACAA sequenced from the forward primer"
gene 1..2248
/gene="STAC2"
/gene_synonym="24b2"
/gene_synonym="24b2/STAC2"
/db_xref="GeneID:342667"
/db_xref="HGNC:HGNC:23990"
CDS 391..1200
/gene="STAC2"
/gene_synonym="24b2"
/gene_synonym="24b2/STAC2"
/codon_start=1
/product="STAC2 protein"
/protein_id="AAI09232.1"
/db_xref="GeneID:342667"
/db_xref="HGNC:HGNC:23990"
/translation="MCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVC
ATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGE
GSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYK
FLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQ
PFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI"
BASE COUNT 485 a 671 c 659 g 433 t
ORIGIN
1 ctttctctgc ccgctcccgc gggttggggg ctgccgtgcc gggggctaac tgggggcagc
61 ctctggagaa cggcttcaga gtcccggaga cgcccgccac ccgcagcctg cccgcggtgg
121 gcctgccgtc ggatctcggc accctctcct cccctctccc cgaaccatga ccgagatgag
181 cgagaaggag aacgaaccgg atgacgcggc cacccacagc cccccaggga ccgtctccgc
241 cctccaggaa accaagctcc agcgattcaa gcgctccctc tccctcaaga ccatcctccg
301 aagtaagagc ttggagaact tcttccttcg ctcgggctct gagctcaagt gccccaccga
361 ggaaactcca aacagggctt gcgatgtaag atgtgcaaag tcagcgtcca cctctggtgc
421 tctgaggaga tctcccacca gcaatgccca ggcaagacgt ccacctcctt ccgccgcaac
481 ttcagttccc ctctcctggt gcatgagccg ccaccagtct gtgccacaag caaagagtcc
541 ccacccactg gggacagtgg gaaggtggac cctgtctacg agaccctgcg ctatggcacc
601 tccctggcac tgatgaaccg ctccagtttc agcagcacct ctgagtcccc gacaaggagc
661 ctgagtgagc gggatgagct gaccgaggat ggggaaggca gcatccgcag ctctgaggag
721 gggcctggtg acagtgcatc tccagtattc acagccccag cagagagtga agggccagga
781 ccagaggaga agagtcctgg acagcagctc cccaaagcca ccctgcggaa ggatgtgggg
841 cccatgtact cctacgttgc actctacaag tttctgcccc aggagaacaa tgatctggct
901 ctgcagcctg gagatcggat catgctggtg gatgactcta acgaggactg gtggaagggc
961 aagatcggcg accgggttgg cttcttccca gctaattttg tgcaacgggt gaggccaggc
1021 gagaatgttt ggcgctgctg ccaacccttc tccgggaaca aggaacaggg ttacatgagc
1081 ctcaaggaga accagatctg cgtgggcgtg ggcagaagca aggatgctga cggcttcatc
1141 cgcgtcagca gtggcaagaa gcggggcctg gtgccagtcg acgccctgac tgagatctga
1201 gaggagccaa gggaacccag atgacaccct tgcccatgcc tggaccttgc ttctggccag
1261 ggaggggatc aggccccctt gtccactcca tacccttcct ccctctgtcc ctctcctagg
1321 tgccacttac tgtggcttag gagccttttg tactggggaa gattttattt cttgggtggg
1381 gtgccctgag tgggttgatc ctctgggact tggcggggat ggggtggggt gggagggaat
1441 gaggaagcta caggtaggtc cacccaacgc ccaggcaccc cagtctactt gctgggctga
1501 gtccagccct ggggaagatt cctggggaat ttatttgctg cttctcccag ccttcccctg
1561 cccacaccac ctgcgcatgc ctggcacacc cctctcccca cagagcctct gcttgggtct
1621 atgtgtgtgt gaccgtgcat ctgctccttt gcaagtgggg tcttgggagc aggccttttt
1681 gtgtcctcgg ccctccaccc ttggtgggga ggggacccag gaccatagga aggtcctgag
1741 tccacctcct ggtctccacc tctgtcattc cgtcaattct caggaaagtt ttgcaggaat
1801 ctctcccgtt acttgaaacc tgggcggaca gatgagggga aggctgaggt ccctggaagg
1861 tgtaacaaat cagagactat ctgttcaagt agaaaaccca agagctggcc aggtgtggtg
1921 gctcatgcct gtaatcccag cactttggga ggctgaggtg ggcagatcac ctgaggtcag
1981 gagttcaaga ccagcctggc caacatggtg aaaccccgtc tctactaaaa gtacgaaact
2041 tagccaggca tgatgggggt ctgcctgtaa tgccagctac tccagaggct gaggcaagag
2101 aatcacttga acccgggagg cggaggtttc agtgagccga gattgcacca ttgcacccca
2161 gcctgggcaa cagagcgaga ctccgtctca aaaaaaaaaa aaagaaagaa aaggaaaccc
2221 aagagctgcc tggacacacg gaaaccca
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