LOCUS BC109102 2650 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2
(beta-1,6-N-acetylglucosaminyltransferase), mRNA (cDNA clone
MGC:126336 IMAGE:40034827), complete cds.
ACCESSION BC109102
VERSION BC109102.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2650)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2650)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: k Column: 16.
FEATURES Location/Qualifiers
source 1..2650
/db_xref="H-InvDB:HIT000339271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126336 IMAGE:40034827"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AATATTTA sequenced from
the reverse primer"
gene 1..2650
/gene="GCNT1"
/gene_synonym="C2GNT"
/gene_synonym="C2GNT-L"
/gene_synonym="C2GNT1"
/gene_synonym="G6NT"
/gene_synonym="NAGCT2"
/db_xref="GeneID:2650"
/db_xref="HGNC:HGNC:4203"
/db_xref="MIM:600391"
CDS 128..1414
/gene="GCNT1"
/gene_synonym="C2GNT"
/gene_synonym="C2GNT-L"
/gene_synonym="C2GNT1"
/gene_synonym="G6NT"
/gene_synonym="NAGCT2"
/codon_start=1
/product="glucosaminyl (N-acetyl) transferase 1, core 2
(beta-1,6-N-acetylglucosaminyltransferase)"
/protein_id="AAI09103.1"
/db_xref="GeneID:2650"
/db_xref="HGNC:HGNC:4203"
/db_xref="MIM:600391"
/translation="MLRTLLRRRLFSYPTKYYFMVLVLSLITFSVLRIHQKPEFVSVR
HLELAGENPSSDINCTKVLQGDVNEIQKVKLEILTVKFKKRPRWTPDDYINMTSDCSS
FIKRRKYIVEPLSKEEAEFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSED
SYLAAVMGIASCFSNVFVASRLESVVYASWSRVQADLNCMKDLYAMSANWKYLINLCG
MDFPIKTNLEIVRKLKLLMGENNLETERMPSHKEERWKKRYEVVNGKLTNTGTVKMLP
PLETPLFSGSAYFVVSREYVGYVLQNEKIQKLMEWAQDTYSPDEYLWATIQRIPEVPG
SLPASHKYDLSDMQAVARFVKWQYFEGDVSKGAPYPPCDGVHVRSVCIFGAGDLNWML
RKHHLFANKFDVDVDLFAIQCLDEHLRHKALETLKH"
BASE COUNT 762 a 515 c 609 g 764 t
ORIGIN
1 aagatgccgt tgcagctctg ataaatgcaa actgacaacc ttcaaggcca cgacggaggg
61 aaaatcattg gtgcttggag catagaagac tgcccttcac aaaggaaatc cctgattatt
121 gtttgaaatg ctgaggacgt tgctgcgaag gagacttttt tcttatccca ccaaatacta
181 ctttatggtt cttgttttat ccctaatcac cttctccgtt ttaaggattc atcaaaagcc
241 tgaatttgta agtgtcagac acttggagct tgctggggag aatcctagta gtgatattaa
301 ttgcaccaaa gttttacagg gtgatgtaaa tgaaatccaa aaggtaaagc ttgagatcct
361 aacagtgaaa tttaaaaagc gccctcggtg gacacctgac gactatataa acatgaccag
421 tgactgttct tctttcatca agagacgcaa atatattgta gaacccctta gtaaagaaga
481 ggcggagttt ccaatagcat attctatagt ggttcatcac aagattgaaa tgcttgacag
541 gctgctgagg gccatctata tgcctcagaa tttctattgc attcatgtgg acacaaaatc
601 cgaggattcc tatttagctg cagtgatggg catcgcttcc tgttttagta atgtctttgt
661 ggccagccga ttggagagtg tggtttatgc atcgtggagc cgggttcagg ctgacctcaa
721 ctgcatgaag gatctctatg caatgagtgc aaactggaag tacttgataa atctttgtgg
781 tatggatttt cccattaaaa ccaacctaga aattgtcagg aagctcaagt tgttaatggg
841 agaaaacaac ctggaaacgg agaggatgcc atcccataaa gaagaaaggt ggaagaagcg
901 gtatgaggtc gttaatggaa agctgacaaa cacagggact gtcaaaatgc ttcctccact
961 cgaaacacct ctcttttctg gcagtgccta cttcgtggtc agtagggagt atgtggggta
1021 tgtactacag aatgaaaaaa tccaaaagtt gatggagtgg gcacaagaca catacagccc
1081 tgatgagtat ctctgggcca ccatccaaag gattcctgaa gtcccgggct cactccctgc
1141 cagccataag tatgatctgt ctgacatgca agcagttgcc aggtttgtca agtggcagta
1201 ctttgagggt gatgtttcca agggtgctcc ctacccgccc tgcgatggag tccatgtgcg
1261 ctcagtgtgc attttcggag ctggtgactt gaactggatg ctgcgcaaac accacttgtt
1321 tgccaataag tttgacgtgg atgttgacct ctttgccatc cagtgtttgg atgagcattt
1381 gagacacaaa gctttggaga cattaaaaca ctgaccatta cgggcaattt tatgaacaag
1441 aagaaggata cacaaaacgt acccttatct gtttcccctt ccttgtcagc atcgggaaga
1501 tggtatgaag tcctctttgg ggcagggact ctagtagatc ttcttgtcag agaagctgca
1561 tggtttctgc agagcacagt tagctagaaa ggtgatagca ttaaatgttc atctagagtt
1621 aatagtggga ggagtaaagg tagccttgag gccagagcag gtagcaaggc attgtggaaa
1681 gaggggacca gggtggctgg ggaagaggcc gatgcataaa gtcagcctgt tcaaagtgct
1741 cagggactta gcaaaatgag aagatgtgac ctgtgccaaa actattttga gaattttaaa
1801 tgtgaccatt tttctggtat gaataaactt acagcaacaa ataatcaaag atacaattaa
1861 tctgatatta tatttgttga aatagaaatt tgattgtact ataaatgatt tttgtaaata
1921 atttatattc tgctctaata ctgtactgtg tagtgtgtct ccgtatgtca tctcagggag
1981 cttaaaatgg gcttgattta acattgtttt tgtgttattt ttgcttgaaa caacgcacac
2041 attttcaaca accaaaaaat gacaatttct agtttagtta atttctacaa atcatcttat
2101 gttattagca aggttaagac atctttttta aaaaaattat agcttctacc aagagaaaca
2161 ctcaattttt ctagagattt gcctctatct tcctttcctc agtcttccca gactgctatc
2221 aagctgtgta aaaatttact ttcactggac cctaaattat tgtctctgct atctgactgc
2281 cagtaattag tgcagaaaac taagacagga tgatacaggt ttgaggggct ggggagtggg
2341 aggggggaga aaaggaatgt atttaaacaa tttccgatgc ccatgatgag tttaaaaacc
2401 agcattgaca ccatccccaa aattaaggct gtcgcttatt gaatccactt gtgtccaacc
2461 tcccaggatt gttttatcct aatgtcacct gtatattcat ttgaaaggac ttggccctgt
2521 tcttgggtct tcccgttacc tgccccctgg gtggtaagtt tcctcctttc tcaaccttcc
2581 acgaggagga aagaagtgtg cagtcattcc acatggcctg ttggaaggcc tggggaggga
2641 actttgggtt
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