LOCUS BC109062 2057 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens zinc finger protein 562, mRNA (cDNA clone MGC:126160
IMAGE:40033739), complete cds.
ACCESSION BC109062
VERSION BC109062.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2057)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2057)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 26, 2006 this sequence version replaced BC109062.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: f Column: 23.
FEATURES Location/Qualifiers
source 1..2057
/db_xref="H-InvDB:HIT000339231"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126160 IMAGE:40033739"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TTTTAAAA sequenced from
the forward primer"
gene 1..2057
/gene="ZNF562"
/gene_synonym="FLJ20079"
/db_xref="GeneID:54811"
/db_xref="HGNC:HGNC:25950"
CDS 107..1387
/gene="ZNF562"
/gene_synonym="FLJ20079"
/codon_start=1
/product="ZNF562 protein"
/protein_id="AAI09063.2"
/db_xref="GeneID:54811"
/db_xref="HGNC:HGNC:25950"
/translation="MSAFDMSHGFFPREPICPFEEKTKIGTMVEDHRSNSYQDSVTFD
DVAVEFTPEEWALLDTTQKYLYRDVMLENYMNLASVDFFFCLTSEWEIQPRTKRSSLQ
QGFLKNQIFTGIQMQTRSYSGWKLCENCGEVFSEQFCLKTHMRAQNGGNTFEGNCYGK
DSISVHKEASIGQELSKFNPCGKVFTLTPGLAVHLEILNGRQPYKCKECGKGFKYFAS
LDNHMGIHIGEKLCEFQECERAITTSSHLKQCVAVHTGKKSEKTKNCGKSFTNFSQLS
AHAKTHKGEKSFECKECGRSFRNSSSFNVHIQIHTGIKPHKCTECGKAFTRSTHLTQH
VRTHTGIKPYECKECGQAFTQYTGLAIHIRNHTGEKPYQCKECGKAFNRSSTLTQHRR
IHTGEKPYECVECGKTFITSSHRSKHLKTHSGER"
BASE COUNT 643 a 418 c 453 g 543 t
ORIGIN
1 gggaatggag attgcctgta tccacctaga ttcataagct gccctgaggc gatcttggca
61 tcaagaaaga cagcattgag gcacatctca ccatcagctt cagaggatgt cagcctttga
121 tatgtcccat gggttttttc ccagggaacc aatctgtcct tttgaagaaa agacaaagat
181 aggaacgatg gtagaggacc accggtcaaa ttcttaccag gattcagtga cgtttgatga
241 tgtggctgtg gagttcaccc cagaggagtg ggctttactg gacacaactc agaaatacct
301 ctacagagat gtgatgctgg agaactacat gaacctggcc tctgtggatt tctttttctg
361 cttaacttca gaatgggaaa tacaacctag aaccaaacgg tcatcacttc agcagggttt
421 tttgaagaat caaatattca ctgggataca aatgcagaca agaagctaca gtggatggaa
481 actctgtgag aattgtggag aggtcttcag tgaacagttt tgccttaaga cacacatgag
541 agctcagaat ggagggaaca cttttgaggg taattgttat ggaaaagaca gcatcagtgt
601 gcacaaggaa gcctctattg gacaagaact ttccaaattt aatccatgtg gaaaagtctt
661 caccttaact ccaggccttg ctgtgcatct tgaaattctc aatggaagac aaccctacaa
721 atgtaaggaa tgtggaaaag gctttaagta ttttgcaagc cttgataatc acatgggaat
781 ccacattgga gagaaactct gtgaatttca ggaatgtgag agagccatca caacttcctc
841 acacttaaag cagtgtgtag cagttcatac tggaaagaaa tccgaaaaga ctaagaactg
901 tgggaaatcc ttcactaatt tttctcaact ttctgcacat gcaaaaactc ataaaggaga
961 gaagtccttt gaatgtaaag aatgtggaag atcctttaga aattcctcat cctttaatgt
1021 tcacattcaa attcacactg gaataaaacc acacaaatgt acggaatgtg ggaaagcctt
1081 cactagatca actcacctta ctcaacatgt aagaactcac actggaataa aaccctatga
1141 atgtaaggaa tgtggccaag ccttcactca gtacacgggc cttgctatac acatacgaaa
1201 tcacactgga gagaaaccct atcagtgtaa ggaatgtggg aaagccttca atagatcttc
1261 aacgcttact caacatagaa gaattcacac aggagagaag ccttatgaat gtgttgaatg
1321 tgggaagacc ttcattactt cttcccatcg tagtaaacat ttgaaaactc acagtggaga
1381 aaggtaaatg caagatatgt gggaaagaat ttctgtattc ctcaccccac ctgtgaactc
1441 ctaccagaga gaaacctttt gtatgtaaag aatttgggaa agcatttgct ctttcctcat
1501 gcctaagtat gcatgaaaga attcacactg gggagaaata ctatgaatgt aaggatatga
1561 gtgttgttac catttagccc attggttgcc atctttaatt attggcagtg caaagatcat
1621 cagattagtc ctaaatgcct tttggaggtt gtaatggctc acagattggc cttagatgca
1681 tcccgagggt ctgaaattaa acctacaggt tctgaataca acatcatggt tacctgagtc
1741 tgggcatctg tgaagaaggg tcatggatgg tgaggtcagt actgcaggct gcctcacctt
1801 ggtgattaga ttcctaagat catagcatta acaagttctg tacgagataa atcatgcaga
1861 ttgatcccag cccctgttgg ttagtggctg ccagtgtggc acattcatgt caaaatttac
1921 cagaagccaa gatgatgtag gccccagagg tggattgtta aaaagatgct cctccaaggt
1981 tctcttctgt tcccatggat cctgcagagc atgtcaggag tgaaaccatc cataactgcc
2041 agtgcccttt cacagct
//