LOCUS BC109023 3184 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens laeverin, mRNA (cDNA clone MGC:125379 IMAGE:40008502),
complete cds.
ACCESSION BC109023
VERSION BC109023.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: j Column: 12.
FEATURES Location/Qualifiers
source 1..3184
/db_xref="H-InvDB:HIT000339192"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:125379 IMAGE:40008502"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TACCTAAT sequenced from
the forward primer"
gene 1..3184
/gene="FLJ90650"
/gene_synonym="LVRN"
/db_xref="GeneID:206338"
/db_xref="MIM:610046"
CDS 29..3001
/gene="FLJ90650"
/gene_synonym="LVRN"
/codon_start=1
/product="laeverin"
/protein_id="AAI09024.1"
/db_xref="GeneID:206338"
/db_xref="MIM:610046"
/translation="MGPPSSSGFYVSRAVALLLAGLVAALLLALAVLAALYGHCERVP
PSELPGLRDSEAESSPPLRQKPTPTPKPSSARELAVTTTPSNWRPPGPWDQLRLPPWL
VPLHYDLELWPQLRPDELPAGSLPFTGRVNITVRCTVATSRLLLHSLFQDCERAEVRG
PLSPGTGNATVGRVPVDDVWFALDTEYMVLELSEPLKPGSSYELQLSFSGLVKEDLRE
GLFLNVYTDQGERRALLASQLEPTFARYVFPCFDEPALKATFNITMIHHPSYVALSNM
PKLGQSEKEDVNGSKWTVTTFSTTPHMPTYLVAFVICDYDHVNRTERGKEIRIWARKD
AIANGSADFALNITGPIFSFLEDLFNISYSLPKTDIIALPSFDNHAMENWGLMIFDES
GLLLEPKDQLTEKKTLISYVVSHEIGHQWFGNLVTMNWWNNIWLNEGFASYFEFEVIN
YFNPKLPRNEIFFSNILHNILREDHALVTRAVAMKVENFKTSEIQELFDIFTYSKGAS
MARMLSCFLNEHLFVSALKSYLKTFSYSNAEQDDLWRHFQMAIDDQSTVILPATIKNI
MDSWTHQSGFPVITLNVSTGVMKQEPFYLENIKNRTLLTSNDTWIVPILWIKNGTTQP
LVWLDQSSKVFPEMQVSDSDHDWVILNLNMTGYYRVNYDKLGWKKLNQQLEKDPKAIP
VIHRLQFIDDAFSLSKNNYIEIETALELTKYLAEEDEIIVWHTVLVNLVTRDLVSEVN
IYDIYSLLKRYLLKRLNLIWNIYSTIIRENVLALQDDYLALISLEKLFVTACWLGLED
CLQLSKELFAKWVDHPENEIPYPIKDVVLCYGIALGSDKEWDILLNTYTNTTNKEEKI
QLAYAMSCSKDPWILNRYMEYAISTSPFTSNETNIIEVVASSEVGRYVAKDFLVNNWQ
AVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFSNMLEEHQRIRVHANLQTIKNEN
LKNKKLSARIAAWLRRNT"
BASE COUNT 897 a 706 c 723 g 858 t
ORIGIN
1 agcctcgcgc ctgaacccgg tccctgccat ggggccccct tccagctcag gcttctatgt
61 gagccgcgca gtggccctgc tgctggctgg gttggtagcc gccctcctgc tggcgctggc
121 cgtactcgcc gccttgtacg gccactgcga gcgcgtccca ccgtcggagc tgcctggact
181 cagggactcg gaagccgagt cttcccctcc cctcaggcag aagccgacgc cgaccccgaa
241 acccagcagt gcacgcgagc tagcggtgac gaccaccccg agcaactggc gacccccggg
301 gccctgggac cagctacgcc tgccgccctg gctcgtgccg ctgcactacg atctggagct
361 gtggccgcag ctgaggcccg acgagcttcc ggccgggtct ttgcccttca ctggccgcgt
421 gaacatcacg gtgcgctgca cggtggccac ctctcgactg ctgctgcata gcctcttcca
481 ggactgcgag cgcgccgagg tgcggggacc cctttccccg ggcactggga acgccacagt
541 gggccgcgtg cccgtggacg acgtgtggtt cgcgctggac acggaataca tggtgctgga
601 gctcagtgag cccctgaaac ctggtagcag ctacgagctg cagcttagct tctcgggcct
661 ggtgaaggaa gacctcaggg agggactctt tctcaacgtc tacaccgacc agggcgagcg
721 cagggccctg ttagcgtccc agctggaacc aacatttgcc aggtatgttt tcccttgttt
781 tgatgagcca gctctgaagg caacttttaa tattacaatg attcatcatc caagttatgt
841 ggccctttcc aacatgccaa agctaggtca gtctgaaaaa gaagatgtga atggaagcaa
901 atggactgtt acaacctttt ccactacgcc ccacatgcca acttacttag tcgcatttgt
961 tatatgtgac tatgaccacg tcaacagaac agaaaggggc aaggagatac gcatctgggc
1021 ccggaaagat gcaattgcaa atggaagtgc agactttgct ttgaacatca caggtcccat
1081 cttctctttt ctggaggatt tgtttaatat cagttactct cttccaaaaa cagatataat
1141 tgccttgcct agttttgaca accatgcaat ggaaaactgg ggactaatga tatttgatga
1201 atcaggattg ttgttggaac caaaagatca actgacagaa aaaaagactc tgatctccta
1261 tgttgtctcc cacgagattg gacaccagtg gtttggaaac ttggttacca tgaattggtg
1321 gaacaatatc tggctcaacg agggttttgc atcttatttt gagtttgaag taattaacta
1381 ctttaatcct aaactcccaa gaaatgagat ctttttttct aacattttac ataatatcct
1441 cagagaagat cacgccctgg tgactagagc tgtggccatg aaggtggaaa atttcaaaac
1501 aagtgaaata caggaactct ttgacatatt tacttacagc aagggagcgt ctatggcccg
1561 gatgctttct tgtttcttga atgagcattt atttgtcagt gcactcaagt catatttgaa
1621 gacattttcc tactcaaacg ctgagcaaga tgatctatgg aggcattttc aaatggccat
1681 agatgaccag agtacagtta ttttgccagc aacaataaaa aacataatgg acagttggac
1741 acaccagagt ggttttccag tgatcacttt aaatgtgtct actggcgtca tgaaacagga
1801 gccattttat cttgaaaaca ttaaaaatcg gactcttcta accagcaatg acacatggat
1861 tgtccctatt ctttggataa aaaatggaac tacacaacct ttagtctggc tagatcaaag
1921 cagcaaagta ttcccagaaa tgcaagtttc agattctgac catgactggg tgattttgaa
1981 tttgaatatg actggatatt atagagttaa ttatgataaa ttaggttgga agaaactaaa
2041 tcaacaactt gaaaaggatc ctaaggctat tcctgttatt cacagactgc agttcattga
2101 tgatgccttt tccttgtcta aaaacaatta tattgagatt gaaacagcac ttgagttaac
2161 caagtacctt gctgaagaag atgaaattat agtatggcat acagtcttgg taaacttggt
2221 aaccagggat cttgtttctg aggtgaacat ctatgatata tactcattat taaagaggta
2281 cctattaaag agacttaatt taatatggaa tatttattca actataattc gtgaaaatgt
2341 gttggcatta caagatgact acttagctct aatatcactg gaaaaacttt ttgtaactgc
2401 gtgttggttg ggccttgaag actgccttca gctgtcaaaa gaacttttcg caaaatgggt
2461 ggatcatcca gaaaatgaaa taccttatcc aattaaagat gtggttttat gttatggcat
2521 tgccttggga agtgataaag agtgggacat cttgttaaat acttacacta atacaacaaa
2581 caaagaagaa aagattcaac ttgcttatgc aatgagctgc agcaaagacc catggatact
2641 taacagatat atggagtatg ccatcagcac atctccattc acttctaatg aaacaaatat
2701 aattgaggtt gtggcttcat ctgaagttgg ccggtatgtc gcaaaagact tcttagtcaa
2761 caactggcaa gctgtgagta aaaggtatgg aacacaatca ttgattaatc taatatatac
2821 aatagggaga accgtaacta cagatttaca gattgtggag ctgcagcagt ttttcagtaa
2881 catgttggag gaacaccaga ggatcagagt tcatgccaac ttacagacaa taaagaatga
2941 aaatctgaaa aacaagaagc taagtgccag gatagctgcg tggctaagga gaaacacata
3001 gcttgtggct atctttcagc actcctcttg catattataa tgtagtttgt tcacagtttt
3061 gtcttccaat actttgtgag tctggaaaac cacacatttt atttgtattt cagtcacatt
3121 tattactcag agtgccattc ttctcatatt gtcatgtttg gccctgaggg tgggtgattg
3181 ctga
//