LOCUS BC108915 867 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens VENT homeobox homolog (Xenopus laevis), mRNA (cDNA clone MGC:119910 IMAGE:40015551), complete cds. ACCESSION BC108915 VERSION BC108915.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 867) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 867) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 8 Row: o Column: 17. FEATURES Location/Qualifiers source 1..867 /db_xref="H-InvDB:HIT000339171" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:119910 IMAGE:40015551" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: TGTATAAT sequenced from the reverse primer" gene 1..867 /gene="VENTX" /gene_synonym="HPX42B" /gene_synonym="NA88A" /db_xref="GeneID:27287" /db_xref="HGNC:HGNC:13639" /db_xref="MIM:607158" CDS 12..788 /gene="VENTX" /gene_synonym="HPX42B" /gene_synonym="NA88A" /codon_start=1 /product="VENT homeobox homolog (Xenopus laevis)" /protein_id="AAI08916.1" /db_xref="GeneID:27287" /db_xref="HGNC:HGNC:13639" /db_xref="MIM:607158" /translation="MRLSSSPPRGPQQLSSFGSVDWLSQSSCSGPTHTPRPADFSPGS LPGPGQTSGAREPPQAVSIKEAAGSSNLPAPERTMAGLSKEPNTLRAPRVRTAFTMEQ VRTLEGVFQHHQYLSPLERKRLAREMQLSEVQIKTWFQNRRMKHKRQMQDPQLHSPFS GSLHAPPAFYSTSSGLANGLQLLCPWAPLSGPQALMLPPGSFWGLCQVAQEALASAGA SCCGQPLASHPPTPGRPSLGPALSTGPRGLCAMPQTGDAF" BASE COUNT 136 a 326 c 246 g 159 t ORIGIN 1 acctggccgc catgcgcctc tcctcctccc cacctcgtgg cccgcagcag ctctccagct 61 ttggctccgt ggactggctc tcccagagca gctgctcagg gccgacccac acccccaggc 121 ctgccgactt ctccccgggg agcctccctg gcccgggcca gacatccggc gcccgggagc 181 cccctcaggc cgtcagcatc aaggaggccg ccgggtcctc aaatctgcct gcgccggaga 241 ggaccatggc cgggttgagt aaggagccaa ataccttgcg ggccccccgt gtccgcacag 301 ccttcaccat ggagcaggtc cgcaccttgg agggcgtctt ccagcaccac cagtacctga 361 gccctctgga gcggaagagg ctggccaggg agatgcagct ctcagaggtc cagataaaaa 421 cctggtttca gaatcgccgc atgaaacaca aacggcaaat gcaggacccc cagctgcaca 481 gccccttctc ggggtctctc catgcgcccc cagctttcta ctcaacgtct tctggccttg 541 ccaatggcct gcagctgctg tgcccttggg cacccctgtc cgggccccag gctctgatgc 601 tgccccctgg ctccttctgg ggtctctgcc aagtggcaca agaggccctg gcatctgcgg 661 gagcttcctg ctgcgggcag cctctggcgt cccacccccc taccccaggc cggccttcgc 721 tgggaccagc cctgtccacg gggccccggg gcctgtgtgc tatgccacag acgggggatg 781 cattttgagg aggcacctct gactcccaca ctcgcggtct tgctgatcgc acctggctcc 841 tacctggagg actcagttgt tctgttt //