LOCUS BC108914 3365 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens leucine rich repeat (in FLII) interacting protein 1,
mRNA (cDNA clone MGC:119739 IMAGE:40027218), complete cds.
ACCESSION BC108914
VERSION BC108914.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3365)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3365)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: m Column: 10.
FEATURES Location/Qualifiers
source 1..3365
/db_xref="H-InvDB:HIT000339170"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119739 IMAGE:40027218"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GTTTATAA sequenced from
the reverse primer"
gene 1..3365
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="GCF2"
/gene_synonym="HUFI-1"
/gene_synonym="MGC10947"
/gene_synonym="TRIP"
/db_xref="GeneID:9208"
/db_xref="HGNC:HGNC:6702"
/db_xref="MIM:603256"
CDS 118..2544
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="GCF2"
/gene_synonym="HUFI-1"
/gene_synonym="MGC10947"
/gene_synonym="TRIP"
/codon_start=1
/product="LRRFIP1 protein"
/protein_id="AAI08915.1"
/db_xref="GeneID:9208"
/db_xref="HGNC:HGNC:6702"
/db_xref="MIM:603256"
/translation="MTSPAAAQSREIDCLSPEAQKLAEARLAAKRAARAEAREIRMKE
LERQQKEEDSERYSRRSRRNTSASDEDERMSVGSRGSLRVEERPEKDFTEKGSRNMPG
LSAATLASLGGTSSRRGSGDTSISIDTEASIREIKELNELKDQIQDVEGKYMQGLKEM
KDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNK
EFEREKHAHSILQFQFAEVKEALKQREEMLEKHGIILNSEIATNGETSDTLNNVGYQG
PTKMTKEELNALKSTGDGTLGRASEVEVKNEIVANVGKREILHNTEKEQHTEDTVKDC
VDIEVFPAGENTEDQKSSEDTAPFLGTLAGATYEEQVQSQILESSSLPENTVQVESNE
VMGAPDDRTRTPLEPSNCWSDLDGGNHTENVGEAAVTQVEEQAGTVASCPLGHSDDTV
YHDDKCMVEVPQELETSTGHSLEKEFTNQEAAEPKEVPAHSTEVGRDHNEEEGEETGL
RDEKPIKTEVPGSPAGTEGNCQEATGPSTVDTQNEPLDMKEPDEEKSDQQGEAFDSSQ
KKTKNKKKKNKKKKSPVPVETLKDVKKELTYQNTDLSEIKEEEQVKSTDRKSAVEAQN
EVTENPKQKIAAESSENVDCPENPKIKLDGKLDQEGDDVQTAAEEVLADGDTLDFEDD
TVQSSGPRAGGEELDEGVAKDNAKIDGATQSSPAEPKSEDADRCTLPEHESPSQDISD
ACEAESTERCEMSEHPSQTVRKALDSNSLENDDLSAPGREPGHFNPESREDTRGGNEK
GKSKEDCTMS"
BASE COUNT 1119 a 658 c 870 g 718 t
ORIGIN
1 cggcgagtgg ctccgtctcc gcggacagag cgcgcgcccc ctggcccggc ccgcgagggg
61 ctcccggcgc ggtccccgag catttcccgc cgggtggagc gggccgagcc cggcaggatg
121 accagccccg cggccgctca aagccgggag atcgactgtt tgagcccgga agcgcagaag
181 ctggcggaag cccggctcgc tgcaaaacgg gcggcccgcg cggaggctcg cgagatccgc
241 atgaaggagc tggagcggca gcagaaggag gaagacagtg agcgctactc tcgtagatcc
301 agaagaaaca catcggcttc tgatgaagac gagcgcatgt cagtgggtag tcgtggaagc
361 ctgagggtag aagagagacc agaaaaagat tttactgaga aggggtctcg taacatgccg
421 ggcctgtctg cagccacgct ggcctctctg ggtgggactt cctctcggag aggcagcgga
481 gacacctcca tctccatcga caccgaggca tccatcaggg aaatcaagga actcaatgag
541 ttaaaggacc agattcagga tgtagaaggc aaatacatgc agggattgaa agagatgaag
601 gactctctag cagaagttga agagaaatat aagaaggcta tggtttccaa tgctcagcta
661 gacaatgaaa agacaaactt catgtaccag gttgataccc taaaagatat gttgctggag
721 cttgaagaac agctggctga atctaggcgg cagtacgaag agaaaaacaa agaatttgaa
781 agggaaaaac acgcccacag tatactgcaa tttcagtttg ctgaagtcaa ggaggccctg
841 aagcaaagag aggaaatgct cgagaaacat ggaataatcc taaattcaga aatagctacc
901 aatggagaga cttccgacac cctcaataat gttggatacc aaggtcctac caagatgaca
961 aaagaagagt taaatgccct caagtcgaca ggggatggga ccctaggaag agccagtgaa
1021 gtggaggtga aaaatgaaat cgtggcgaat gtggggaaaa gagaaatctt gcacaatact
1081 gagaaagaac aacacacaga ggacacagtg aaggactgtg tggacataga ggtattccct
1141 gctggtgaga ataccgagga ccagaaatcc tctgaagaca ctgccccatt cctaggaacc
1201 ttagcaggtg ctacctatga ggaacaggtt caaagccaaa ttcttgagag cagttctctc
1261 cctgaaaaca cagtacaggt tgagtcaaat gaggtcatgg gtgcaccaga tgacaggacc
1321 agaactcccc ttgagccatc caactgttgg agtgacttag atggtgggaa ccacacagag
1381 aatgtgggag aggcagcagt gactcaggtt gaagagcagg caggcacagt ggcctcgtgt
1441 cctttagggc atagtgatga cacagtttat catgatgaca aatgtatggt agaggtcccc
1501 caagagttag agacaagcac agggcatagt ttagagaaag aattcaccaa ccaggaagca
1561 gctgagccca aggaggttcc agcgcacagt acagaagtag gtagggatca caacgaagaa
1621 gagggtgaag aaacaggatt aagggacgag aaaccaatca agacagaagt tcctggttct
1681 ccagcaggaa ctgagggcaa ctgtcaggaa gcgacaggtc caagtacagt agacactcaa
1741 aatgaaccct tagatatgaa agagcccgat gaagaaaaga gtgaccaaca gggagaggca
1801 tttgactcat cgcagaagaa gacaaagaac aagaaaaaga aaaacaagaa gaaaaaatcc
1861 ccagtacccg tagaaaccct taaagatgtt aaaaaagagt taacgtatca gaacacagat
1921 ttaagtgaaa ttaaggaaga agagcaggta aagtctactg acagaaagtc agcagtggaa
1981 gcccaaaacg aggtgactga aaatccaaaa cagaaaattg cagcagaaag cagtgaaaat
2041 gttgattgtc cggagaatcc taaaattaag ttggatggaa aacttgacca agaaggtgat
2101 gatgtacaaa cagcagctga ggaggtacta gctgatggag acacattaga ttttgaggat
2161 gacaccgttc aatcatcagg cccgagggct ggtggtgaag aattagatga aggtgttgca
2221 aaagataatg ctaaaataga tggtgccact caaagcagtc ctgcagaacc aaagagcgaa
2281 gacgcagatc gctgcaccct gcccgaacat gaaagtccct cacaggacat tagtgatgcc
2341 tgtgaagcag aaagtacaga gaggtgtgag atgtcagaac atccaagtca gaccgtcagg
2401 aaagctttag acagcaatag cctagagaac gatgacttgt cggcaccagg aagagagcca
2461 gggcacttca atccagaaag cagagaagat accagaggag ggaatgagaa gggcaaaagc
2521 aaagaagact gtaccatgtc ctaagctgag gcaggcggca ggcgcggtgc acaggaagtc
2581 tcagtgtgaa ggggtctttt ctctccactg ccaatgtaag tagaatgttc taaattcata
2641 gagaggcact gtatgacaat taccaggtgc tctactgctt taagttatag actgttactt
2701 gtagatttcc atgtaatcat tgaggttatc acccagatta gaaagacata tttgttatca
2761 gtgtacgttc taattgagag cattccagta gtatcaaaca ataatgtcta ctgtttatag
2821 tccacttaat aaaaatagag gcatttacta tttgccttag gctgatagga atgtgggttt
2881 tcttgaccaa atatatcagc atctaattga aatgaccaaa tagcattctt agacttctgt
2941 attatgaata taattgatat ttaaattaat gtcttgttca catatgtgta ctttcatatt
3001 tgattttaaa atgtacatta taacctgtat ggtattttat ttaaaggaga taaacagcca
3061 aatagcaaat aggtcactga atgataagat ttgcacctta gaacaataat cattttaagg
3121 ataacaagta aatgtctgaa agcatgaggg gctttatttg cctttacctc atatgagtct
3181 ttgatcttga accgatactt ttggatctca ttgttgatat acctgaattt actttgtaag
3241 agattttaac ttcacttcat gctgatgatg tatcaaattc attttataga aagatttaaa
3301 gtttttttct ggaagtgata tatgtcaaat tacatttcct actgcagtat ttgagcaggg
3361 acagt
//