LOCUS BC108913 3197 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens leucine rich repeat (in FLII) interacting protein 1,
mRNA (cDNA clone MGC:119738 IMAGE:40027210), complete cds.
ACCESSION BC108913
VERSION BC108913.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3197)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: m Column: 9.
FEATURES Location/Qualifiers
source 1..3197
/db_xref="H-InvDB:HIT000339169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119738 IMAGE:40027210"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TATCACAT sequenced from
the reverse primer"
gene 1..3197
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="GCF2"
/gene_synonym="HUFI-1"
/gene_synonym="MGC10947"
/gene_synonym="TRIP"
/db_xref="GeneID:9208"
/db_xref="HGNC:HGNC:6702"
/db_xref="MIM:603256"
CDS 118..2376
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="GCF2"
/gene_synonym="HUFI-1"
/gene_synonym="MGC10947"
/gene_synonym="TRIP"
/codon_start=1
/product="LRRFIP1 protein"
/protein_id="AAI08914.1"
/db_xref="GeneID:9208"
/db_xref="HGNC:HGNC:6702"
/db_xref="MIM:603256"
/translation="MTSPAAAQSREIDCLSPEAQKLAEARLAAKRAARAEAREIRMKE
LERQQKEVEERPEKDFTEKGSRNMPGLSAATLASLGGTSSRRGSGDTSISIDTEASIR
EIKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEK
NKEFEREKHAHSILQFQFAEVKEALKQREEMLEKHGIILNSEIATNGETSDTLNNVGY
QGPTKMTKEELNALKSTGDGTLGRASEVEVKNEIVANVGKREILHNTEKEQHTEDTVK
DCVDIEVFPAGENTEDQKSSEDTAPFLGTLAGATYEEQVQSQILESSSLPENTVQVES
NEVMGAPDDRTRTPLEPSNCWSDLDGGNHTENVGEAAVTQVEEQAGTVASCPLGHSDD
TVYHDDKCMVEVPQELETSTGHSLEKEFTNQEAAEPKEVPAHSTEVGRDHNEEEGEET
GLRDEKPIKTEVPGSPAGTEGNCQEATGPSTVDTQNEPLDMKEPDEEKSDQQGEALDS
SQKKTKNKKKKNKKKKSPVPVETLKDVKKELTYQNTDLSEIKEEEQVKSTDRKSAVEA
QNEVTENPKQKIAAESSENVDCPENPKIKLDGKLDQEGDDVQTAAEEVLADGDTLDFE
DDTVQSSGPRAGGEELDEGVAKDNAKIDGATQSSPAEPKSEDADRCTLPEHESPSQDI
SDACEAESTERCEMSEHPSQTVRKALDSNSLENDDLSAPGREPGHFNPESREDTRGGN
EKGKSKEDCTMS"
BASE COUNT 1062 a 630 c 819 g 686 t
ORIGIN
1 cggcgagtgg ctccgtctcc gcggacagag cgcgcgcccc ctggcccggc ccgcgagggg
61 ctcccggcgc ggtccccgag catttcccgc cgggtggagc gggccgagcc cggcaggatg
121 accagccccg cggccgctca aagccgggag atcgactgtt tgagcccgga agcgcagaag
181 ctggcggaag cccggctcgc tgcaaaacgg gcggcccgcg cggaggctcg cgagatccgc
241 atgaaggagc tggagcggca gcagaaggag gtagaagaga gaccagaaaa agattttact
301 gagaaggggt ctcgtaacat gccgggcctg tctgcagcca cgctggcctc tctgggtggg
361 acttcctctc ggagaggcag cggagacacc tccatctcca tcgacaccga ggcatccatc
421 agggaaatca aggactctct agcagaagtt gaagagaaat ataagaaggc tatggtttcc
481 aatgctcagc tagacaatga aaagacaaac ttcatgtacc aggttgatac cctaaaagat
541 atgttgctgg agcttgaaga acagctggct gaatctaggc ggcagtacga agagaaaaac
601 aaagaatttg aaagggaaaa acacgcccac agtatactgc aatttcagtt tgctgaagtc
661 aaggaggccc tgaagcaaag agaggaaatg ctcgagaaac atggaataat cctaaattca
721 gaaatagcta ccaatggaga gacttccgac accctcaata atgttggata ccaaggtcct
781 accaagatga caaaagaaga gttaaatgcc ctcaagtcga caggggatgg gaccctagga
841 agagccagtg aagtggaggt gaaaaatgaa atcgtggcga atgtggggaa aagagaaatc
901 ttgcacaata ctgagaaaga acaacacaca gaggacacag tgaaggactg tgtggacata
961 gaggtattcc ctgctggtga gaataccgag gaccagaaat cctctgaaga cactgcccca
1021 ttcctaggaa ccttagcagg tgctacctat gaggaacagg ttcaaagcca aattcttgag
1081 agcagttctc tccctgaaaa cacagtacag gttgagtcaa atgaggtcat gggtgcacca
1141 gatgacagga ccagaactcc ccttgagcca tccaactgtt ggagtgactt agatggtggg
1201 aaccacacag agaatgtggg agaggcagca gtgactcagg ttgaagagca ggcaggcaca
1261 gtggcctcgt gtcctttagg gcatagtgat gacacagttt atcatgatga caaatgtatg
1321 gtagaggtcc cccaagagtt agagacaagc acagggcata gtttagagaa agaattcacc
1381 aaccaggaag cagctgagcc caaggaggtt ccagcgcaca gtacagaagt aggtagggat
1441 cacaacgaag aagagggtga agaaacagga ttaagggacg agaaaccaat caagacagaa
1501 gttcctggtt ctccagcagg aactgagggc aactgtcagg aagcgacagg tccaagtaca
1561 gtagacactc aaaatgaacc cttagatatg aaagagcccg atgaagaaaa gagtgaccaa
1621 cagggagagg cattggactc atcgcagaag aagacaaaga acaagaaaaa gaaaaacaag
1681 aagaaaaaat ccccagtacc cgtagaaacc cttaaagatg ttaaaaaaga gttaacgtat
1741 cagaacacag atttaagtga aattaaggaa gaagagcagg taaagtctac tgacagaaag
1801 tcagcagtgg aagcccaaaa cgaggtgact gaaaatccaa aacagaaaat tgcagcagaa
1861 agcagtgaaa atgttgattg tccggagaat cctaaaatta agttggatgg aaaacttgac
1921 caagaaggtg atgatgtaca aacagcagct gaggaggtac tagctgatgg agacacatta
1981 gattttgagg atgacaccgt tcaatcatca ggcccgaggg ctggtggtga agaattagat
2041 gaaggtgttg caaaagataa tgctaaaata gatggtgcca ctcaaagcag tcctgcagaa
2101 ccaaagagcg aagacgcaga tcgctgcacc ctgcccgaac atgaaagtcc ctcacaggac
2161 attagtgatg cctgtgaagc agaaagtaca gagaggtgtg agatgtcaga acatccaagt
2221 cagaccgtca ggaaagcttt agacagcaat agcctagaga acgatgactt gtcggcacca
2281 ggaagagagc cagggcactt caatccagaa agcagagaag ataccagagg agggaatgag
2341 aagggcaaaa gcaaagaaga ctgtaccatg tcctaagctg aggcaggcgg caggcgcggt
2401 gcacaggaag tctcagtgtg aaggggtctt ttctctccac tgccaatgta agtagaatgt
2461 tctaaattca tagagaggca ctgtatgaca attaccaggt gctctactgc tttaagttat
2521 agactgttac ttgtagattt ccatgtaatc attgaggtta tcacccagat tagaaagaca
2581 tatttgttat cagtgtacgt tctaattgag agcattccag tagtatcaaa caataatgtc
2641 tactgtttat agtccactta ataaaaatag aggcatttac tatttgcctt aggctgatag
2701 gaatgtgggt tttcttgacc aaatatatca gcatctaatt gaaatgacca aatagcattc
2761 ttagacttct gtattatgaa tataattgat atttaaatta atgtcttgtt cacatatgtg
2821 tactttcata tttgatttta aaatgtacat tataacctgt atggtatttt atttaaagga
2881 gataaacagc caaatagcaa ataggtcact gaatgataag atttgcacct tagaacaata
2941 atcattttaa ggataacaag taaatgtctg aaagcatgag gggctttatt tgcctttacc
3001 tcatatgagt ctttgatctt gaaccgatac ttttggatct cattgttgat atacctgaat
3061 ttactttgta agagatttta acttcacttc atgctgatga tgtatcaaat tcattttata
3121 gaaagattta aagttttttt ctggaagtga tatatgtcaa attacatttc ctactgcagt
3181 atttgagcag ggacagt
//