LOCUS BC108900 627 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens uroplakin 3A, mRNA (cDNA clone MGC:119178 IMAGE:40004236), complete cds. ACCESSION BC108900 VERSION BC108900.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 627) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 627) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 26, 2006 this sequence version replaced BC108900.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 8 Row: d Column: 5. FEATURES Location/Qualifiers source 1..627 /db_xref="H-InvDB:HIT000339156" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:119178 IMAGE:40004236" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: GGTCTTTA sequenced from the forward primer" gene 1..627 /gene="UPK3A" /gene_synonym="UPIII" /db_xref="GeneID:7380" /db_xref="HGNC:HGNC:12580" CDS 24..524 /gene="UPK3A" /gene_synonym="UPIII" /codon_start=1 /product="UPK3A protein" /protein_id="AAI08901.1" /db_xref="GeneID:7380" /db_xref="HGNC:HGNC:12580" /translation="MPPLWALLALGCLRFGSAVNLQPQLASVTFATNNPTLTTVALEK PLCMFDSKEALTGTHEVYLYVLVDSVTPYSTIDTWPGRRSGGMIVITSILGSLPFFLL VGFAGAIALSLVDMGSSDGETTHDSQITQEAVPKSLGASESSYTSVNRGPPLDRAEVY SSKLQD" BASE COUNT 107 a 216 c 175 g 129 t ORIGIN 1 gctctggcgg ctcctcccgg gcgatgcctc cgctctgggc cctgctggcc ctcggctgcc 61 tgcggttcgg ctcggctgtg aacctgcagc cccaactggc cagtgtgact ttcgccacca 121 acaaccccac acttaccact gtggccttgg aaaagcctct ctgcatgttt gacagcaaag 181 aggccctcac tggcacccac gaggtctacc tgtatgtcct ggtcgactca gtcaccccat 241 actcgacgat cgacacgtgg ccaggccggc ggagcggagg catgatcgtc atcacttcca 301 tcctgggctc cctgcccttc tttctacttg tgggttttgc tggcgccatt gccctcagcc 361 tcgtggacat ggggagttct gatggggaaa cgactcacga ctcccaaatc actcaggagg 421 ctgttcccaa gtcgctgggg gcctcggagt cttcctacac gtccgtgaac cgggggccgc 481 cactggacag ggctgaggtg tattccagca agctccaaga ctgagcccag caccacccct 541 gggcagcagc atcctcctct ctggccttgc cccaggccct gcagcggtgg ttgtcacacc 601 ctgacttcag ggaaggtgaa acagggc //