LOCUS BC108893 2656 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens SH3 domain containing 19, mRNA (cDNA clone MGC:118913
IMAGE:40001767), complete cds.
ACCESSION BC108893
VERSION BC108893.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2656)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2656)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 7 Row: b Column: 20.
FEATURES Location/Qualifiers
source 1..2656
/db_xref="H-InvDB:HIT000386494"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:118913 IMAGE:40001767"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CCAATTTT sequenced from
the forward primer"
gene 1..2656
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
CDS 199..2385
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/codon_start=1
/product="SH3D19 protein"
/protein_id="AAI08894.1"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
/translation="MNTEQSQNSIVSRIKVFEGQTNIETSGLPKKPEITPRSLPPKPT
VSSGKPSVAPKPAANRASGEWDSGTENRLKVTSKEGLTPYPPLQEAGSIPVTKPELPK
KPNPGLIRSVNPEIPGRGPLAESSDSGKKVPTPAPRPLLLKKSVSSENPTYPSAPLKP
VTVPPRLAGASQAKAYKSLGEGPPANPPVPVLQSKPLVDIDLISFDDDVLPTPSGNLA
EESVGSEMVLGLHEDPQSPPPLPAEKPIGNTFSTVSGKLSNVERTRNLESNHPGQTGG
FVRVPPRLPPRPVNGKTIPTQQPPTKVPPERPPPPKLSATRRSNKKLPFNRSSSDMDL
QKKQSNLATGLSKAKSQVFKNQDPVLPPRPKPGHPLYSKYMRGDVLVMLKQTENNYLE
CQKGEDTGRVHLSQMKIITPLDEHLRSRPNDPSHAQKPVDSGAPHAVVLHDFPAEQVD
DLNLTSGEIVYLLEKIDTDWYRGNCRNQIGIFPANYVKVIIDIPEGGNGKRECVSSHC
VKGSRCVARFEYIGEQKDELSFSEGEIIILKEYVNEEWARGEVRGRTGIFPLNFVEPV
EDYPTSGANVLSTKVPLKTKKEDSGSNSQVNSLPAEWCEALHSFTAETSDDLSFKRGD
RIQILERLDSDWCRGRLQDREGIFPAVFVRPCPAEAKSMLAIVPKGRKAKALYDFRGE
NEDELSFKAGDIITELESVDDDWMSGELMGKSGIFPKNYIQFLQIS"
BASE COUNT 818 a 616 c 610 g 612 t
ORIGIN
1 cccagtgcta caagatgtcc agtgccaaaa ccaagatcaa aaagcaacct cagaccaata
61 cccagagatt ctcacattaa agagcaaagt caacagaaaa tcagcccagc agccgtagga
121 gaggagtcat ccccaggccg gccccagtct ctgctggaca acgctagcac ctcagacagt
181 caggcagtga tgaacattat gaacacagaa caaagccaaa atagtattgt ttccagaatt
241 aaagtgtttg agggtcagac aaacatagaa acctcaggac tgcccaagaa accagaaatt
301 actccacgtt cacttcctcc aaagcctact gtttcctcag ggaaaccttc tgtagctccc
361 aaaccagctg ctaacagagc ttctggagag tgggactctg ggactgagaa cagactcaag
421 gtgacctcca aggaaggact caccccatac cctcccctgc aagaagcggg aagcatccca
481 gtaaccaaac ctgaattgcc aaagaaacca aaccctggcc ttatacgaag tgttaatcct
541 gagattccgg gaagagggcc cctggctgag agctctgata gtgggaagaa agtgccaact
601 cctgccccgc ggcctttgct gctgaagaaa tctgtttcct cagaaaaccc cacctaccct
661 tcagctccac tgaaacctgt cactgttcct ccccgactcg caggggcatc acaagccaaa
721 gcatacaagt cactgggaga agggccccca gccaaccccc cagttccagt tctgcagagc
781 aagcccttgg tggacatcga tctcatcagc tttgatgatg atgttttgcc caccccatcg
841 gggaacctgg ctgaagaatc tgttggttca gagatggttc taggtttaca tgaggatcca
901 caaagtccac ctcctctccc tgctgaaaaa cctattggaa acactttcag tacagtatct
961 ggaaagctca gtaatgttga gagaactaga aacttggaat ccaaccaccc aggtcaaaca
1021 ggaggttttg tgcgagtacc cccaaggttg ccaccgagac ctgtgaatgg aaaaaccatt
1081 ccaactcaac agcctccaac caaggtgccc cctgagagac cacctccccc aaagctttct
1141 gcaaccagaa gatctaataa gaaactgcct tttaatcgat cctcttctga catggatctt
1201 cagaaaaaac aaagtaactt ggcaactgga ctctcaaaag ccaagagtca agtttttaaa
1261 aatcaagatc cggtgctacc ccctcgtccc aaaccaggac accctctcta cagtaaatac
1321 atgcgtgggg atgtacttgt gatgctgaag cagacggaaa ataattactt ggagtgccaa
1381 aagggagaag acactggcag agttcacctg tctcaaatga agattatcac tccacttgat
1441 gaacatctta gaagcagacc aaacgatcca agccacgctc agaagcctgt tgacagtggt
1501 gctcctcatg ctgtcgttct tcatgatttc ccagcagagc aagttgatga tttgaacctc
1561 acttctggag aaattgttta tcttctggag aagatagata cagattggta cagagggaac
1621 tgtagaaacc agattggcat atttcctgcc aactatgtca aagtgattat tgatatccca
1681 gaaggaggaa atgggaaaag agaatgtgtt tcatctcatt gtgttaaagg ctcaagatgt
1741 gttgctcggt ttgaatatat tggagagcag aaggatgagt tgagtttctc agagggagaa
1801 attattattc ttaaagagta tgtgaatgag gaatgggcca gaggagaagt tcgaggcaga
1861 actgggattt tccccctgaa ctttgtggag cctgttgagg attatcccac ctctggtgca
1921 aatgttttaa gcacaaaggt accactgaaa accaaaaaag aagattctgg ctcaaactct
1981 caggttaaca gtcttccggc agaatggtgt gaagctcttc acagttttac agcagagacc
2041 agtgatgact tatcattcaa gaggggagac cggatccaga ttctggaacg tctggattct
2101 gactggtgca ggggcagact gcaggacagg gaggggatct tcccagcagt gtttgtgagg
2161 ccctgcccag ctgaggcaaa aagtatgttg gccatagtac cgaaggggag gaaggccaaa
2221 gccttatatg atttccgagg ggagaatgaa gatgaacttt ccttcaaggc tggagatata
2281 ataacagagc tggaatctgt agatgatgac tggatgagtg gagaacttat gggaaaatct
2341 ggaatatttc ccaaaaacta catacagttt ctacagatca gctagaggag aagcttgtct
2401 gtgttccttg gcacaagaac tcacttgaac tatcaccttg actatcagat atgtttttgc
2461 actatttttt ttaactgaaa aagaaatatc taagctgtac atggtacact agaattttct
2521 gaaagcagaa aacgttcaga ttttgtagtt aattttcatt acaatagaaa catgcacatg
2581 gaaacccatg agctaggatt ctaccgagga aaacatctag tgggattagc aaggtgaagg
2641 gaaagcatct ggtggc
//