LOCUS BC108892 2764 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens SH3 domain containing 19, mRNA (cDNA clone MGC:118912
IMAGE:40001766), complete cds.
ACCESSION BC108892
VERSION BC108892.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2764)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2764)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 7 Row: b Column: 19.
FEATURES Location/Qualifiers
source 1..2764
/db_xref="H-InvDB:HIT000386493"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:118912 IMAGE:40001766"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GTAACCTT sequenced from
the forward primer"
gene 1..2764
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
CDS 199..2493
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/codon_start=1
/product="SH3D19 protein"
/protein_id="AAI08893.1"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
/translation="MNTEQSQNSIVSRIKVFEGQTNIETSGLPKKPEITPRSLPPKPT
VSSGKPSVAPKPAANRASGEWDSGTENRLKVTSKEGLTPYPPLQEAGSIPVTKPELPK
KPNPGLIRSVNPEIPGRGPLAESSDSGKKVPTPAPRPLLLKKSVSSENPTYPSAPLKP
VTVPPRLAGASQAKAYKSLGEGPPANPPVPVLQSKPLVDIDLISFDDDVLPTPSGNLA
EESVGSEMVLDPFQLPAKTEPIKERAVQPAPTRKPTVIRIPAKPGKCLHEDPQSPPPL
PAEKPIGNTFSTVSGKLSNVERTRNLESNHPGQTGGFVRVPPRLPPRPVNGKTIPTQQ
PPTKVPPERPPPPKLSATRRSNKKLPFNRSSSDMDLQKKQSNLATGLSKAKSQVFKNQ
DPVLPPRPKPGHPLYSKYMRGDVLVMLKQTENNYLECQKGEDTGRVHLSQMKIITPLD
EHLRSRPNDPSHAQKPVDSGAPHAVVLHDFPAEQVDDLNLTSGEIVYLLEKIDTDWYR
GNCRNQIGIFPANYVKVIIDIPEGGNGKRECVSSHCVKGSRCVARFEYIGEQKDELSF
SEGEIIILKEYVNEEWARGEVRGRTGIFPLNFVEPVEDYPTSGANVLSTKVPLKTKKE
DSGSNSQVNSLPAEWCEALHSFTAETSDDLSFKRGDRIQILERLDSDWCRGRLQDREG
IFPAVFVRPCPAEAKSMLAIVPKGRKAKALYDFRGENEDELSFKAGDIITELESVDDD
WMSGELMGKSGIFPKNYIQFLQIS"
BASE COUNT 860 a 650 c 626 g 628 t
ORIGIN
1 cccagtgcta caagatgtcc agtgccaaaa ccaagatcaa aaagcaacct cagaccaata
61 cccagagatt ctcacattaa agagcaaagt caacagaaaa tcagcccagc agccgtagga
121 gaggagtcat ccccaggccg gccccagtct ctgctggaca acgctagcac ctcagacagt
181 caggcagtga tgaacattat gaacacagaa caaagccaaa atagtattgt ttccagaatt
241 aaagtgtttg agggtcagac aaacatagaa acctcaggac tgcccaagaa accagaaatt
301 actccacgtt cacttcctcc aaagcctact gtttcctcag ggaaaccttc tgtagctccc
361 aaaccagctg ctaacagagc ttctggagag tgggactctg ggactgagaa cagactcaag
421 gtgacctcca aggaaggact caccccatac cctcccctgc aagaagcggg aagcatccca
481 gtaaccaaac ctgaattgcc aaagaaacca aaccctggcc ttatacgaag tgttaatcct
541 gagattccgg gaagagggcc cctggctgag agctctgata gtgggaagaa agtgccaact
601 cctgccccgc ggcctttgct gctgaagaaa tctgtttcct cagaaaaccc cacctaccct
661 tcagctccac tgaaacctgt cactgttcct ccccgactcg caggggcatc acaagccaaa
721 gcatacaagt cactgggaga agggccccca gccaaccccc cagttccagt tctgcagagc
781 aagcccttgg tggacatcga tctcatcagc tttgatgatg atgttttgcc caccccatcg
841 gggaacctgg ctgaagaatc tgttggttca gagatggttc tagatccctt tcagctccct
901 gcaaaaacag aaccaataaa agaacgagca gttcaaccag cacccaccag gaagcccact
961 gtaattcgaa ttccagccaa accaggaaaa tgtttacatg aggatccaca aagtccacct
1021 cctctccctg ctgaaaaacc tattggaaac actttcagta cagtatctgg aaagctcagt
1081 aatgttgaga gaactagaaa cttggaatcc aaccacccag gtcaaacagg aggttttgtg
1141 cgagtacccc caaggttgcc accgagacct gtgaatggaa aaaccattcc aactcaacag
1201 cctccaacca aggtgccccc tgagagacca cctcccccaa agctttctgc aaccagaaga
1261 tctaataaga aactgccttt taatcgatcc tcttctgaca tggatcttca gaaaaaacaa
1321 agtaacttgg caactggact ctcaaaagcc aagagtcaag tttttaaaaa tcaagatccg
1381 gtgctacccc ctcgtcccaa accaggacac cctctctaca gtaaatacat gcgtggggat
1441 gtacttgtga tgctgaagca gacggaaaat aattacttgg agtgccaaaa gggagaagac
1501 actggcagag ttcacctgtc tcaaatgaag attatcactc cacttgatga acatcttaga
1561 agcagaccaa acgatccaag ccacgctcag aagcctgttg acagtggtgc tcctcatgct
1621 gtcgttcttc atgatttccc agcagagcaa gttgatgatt tgaacctcac ttctggagaa
1681 attgtttatc ttctggagaa gatagataca gattggtaca gagggaactg tagaaaccag
1741 attggcatat ttcctgccaa ctatgtcaaa gtgattattg atatcccaga aggaggaaat
1801 gggaaaagag aatgtgtttc atctcattgt gttaaaggct caagatgtgt tgctcggttt
1861 gaatatattg gagagcagaa ggatgagttg agtttctcag agggagaaat tattattctt
1921 aaagagtatg tgaatgagga atgggccaga ggagaagttc gaggcagaac tgggattttc
1981 cccctgaact ttgtggagcc tgttgaggat tatcccacct ctggtgcaaa tgttttaagc
2041 acaaaggtac cactgaaaac caaaaaagaa gattctggct caaactctca ggttaacagt
2101 cttccggcag aatggtgtga agctcttcac agttttacag cagagaccag tgatgactta
2161 tcattcaaga ggggagaccg gatccagatt ctggaacgtc tggattctga ctggtgcagg
2221 ggcagactgc aggacaggga ggggatcttc ccagcagtgt ttgtgaggcc ctgcccagct
2281 gaggcaaaaa gtatgttggc catagtaccg aaggggagga aggccaaagc cttatatgat
2341 ttccgagggg agaatgaaga tgaactttcc ttcaaggctg gagatataat aacagagctg
2401 gaatctgtag atgatgactg gatgagtgga gaacttatgg gaaaatctgg aatatttccc
2461 aaaaactaca tacagtttct acagatcagc tagaggagaa gcttgtctgt gttccttggc
2521 acaagaactc acttgaacta tcaccttgac tatcagatat gtttttgcac tatttttttt
2581 aactgaaaaa gaaatatcta agctgtacat ggtacactag aattttctga aagcagaaaa
2641 cgttcagatt ttgtagttaa ttttcattac aatagaaaca tgcacatgga aacccatgag
2701 ctaggattct accgaggaaa acatctagtg ggattagcaa ggtgaaggga aagcatctgg
2761 tggc
//