LOCUS BC108730 1024 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens chromosome 18 open reading frame 21, mRNA (cDNA clone
MGC:131953 IMAGE:5187778), complete cds.
ACCESSION BC108730
VERSION BC108730.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1024)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1024)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: d Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361962.
FEATURES Location/Qualifiers
source 1..1024
/db_xref="H-InvDB:HIT000339134"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131953 IMAGE:5187778"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1024
/gene="C18orf21"
/gene_synonym="HsT3108"
/gene_synonym="PNAS-124"
/gene_synonym="PNAS-131"
/gene_synonym="XTP13"
/db_xref="GeneID:83608"
/db_xref="HGNC:HGNC:28802"
CDS 65..727
/gene="C18orf21"
/gene_synonym="HsT3108"
/gene_synonym="PNAS-124"
/gene_synonym="PNAS-131"
/gene_synonym="XTP13"
/codon_start=1
/product="chromosome 18 open reading frame 21"
/protein_id="AAI08731.1"
/db_xref="GeneID:83608"
/db_xref="HGNC:HGNC:28802"
/translation="MRQKHYLEAAARGLHDSCPGQARYLLWAYTSSHDDKSTFEETCP
YCFQLLVLDNSRVRLKPKARLTPKIQKLLNREARNYTLSFKEAKMVKKFKDSKSVLLI
TCKTCNRTVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPA
SVFRTPTSGQSVSTCSSKNTSKTKKHFSQLKMLLSQNESQKIPKVDFRNFLSSLKGGL
LK"
BASE COUNT 357 a 222 c 198 g 247 t
ORIGIN
1 cgacttccgg cgccctattt tctcacctgg ttcccgcggc gagccagcgg cagcggcggc
61 ggcgatgaga cagaagcact accttgaggc tgcagcgcgg ggactgcacg acagctgccc
121 gggccaagcc cgctacctcc tctgggccta cacttcgtcg cacgatgata agagcacttt
181 tgaagaaacg tgtccatact gtttccagct gttggttctg gataactctc gagtgcgtct
241 caaacccaaa gccaggttga cacccaaaat acagaaactt cttaatcgag aagcgagaaa
301 ctatacactc agttttaaag aagcaaaaat ggtgaaaaag ttcaaagact ccaaaagtgt
361 attgttgatc acttgtaaaa catgcaacag aacagtgaaa catcatggta aaagtagaag
421 ctttgtgtca acattgaaga gcaatcctgc cactcctaca agtaaactca gcctgaagac
481 accagagaga aggactgcaa acccaaatca tgacatgtct ggctcgaaag gcaagagccc
541 agcatcggtt ttcagaacac ctacatctgg acagtcagta tctacttgct cctcaaagaa
601 caccagcaaa acaaagaaac acttctctca actaaaaatg ttacttagtc agaatgaatc
661 ccaaaagatt ccaaaggtgg acttcagaaa tttcttatct tctctgaagg gtggactttt
721 aaaataagaa atgcctgatg tcaattctga aactaaagtt ggtaaaacaa ctttttaaac
781 tcttattcat tttttgaata catggaaact agatctgaat gcaaactttt cttggcatcc
841 ttcagtgttt atggggaaaa tacctcatta gtgtgaatac ctgaaacctg cctacctcat
901 aggacagctg tgaggatcaa aaaatatatg aaagttcctt gtagatacat atctatagat
961 atatatgtgt atgtatataa agatagatat atacaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaa
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