LOCUS BC108719 2150 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens folate hydrolase (prostate-specific membrane antigen)
1, mRNA (cDNA clone IMAGE:6196956), partial cds.
ACCESSION BC108719
VERSION BC108719.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2150)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2150)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30410031.
FEATURES Location/Qualifiers
source 1..2150
/db_xref="H-InvDB:HIT000339123"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6196956"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2150
/gene="FOLH1"
/gene_synonym="FGCP"
/gene_synonym="GCP2"
/gene_synonym="GCPII"
/gene_synonym="mGCP"
/gene_synonym="NAALAD1"
/gene_synonym="NAALAdase"
/gene_synonym="PSM"
/gene_synonym="PSMA"
/db_xref="GeneID:2346"
/db_xref="HGNC:HGNC:3788"
/db_xref="IMGT/GENE-DB:3788"
/db_xref="MIM:600934"
CDS <1..2018
/gene="FOLH1"
/gene_synonym="FGCP"
/gene_synonym="GCP2"
/gene_synonym="GCPII"
/gene_synonym="mGCP"
/gene_synonym="NAALAD1"
/gene_synonym="NAALAdase"
/gene_synonym="PSM"
/gene_synonym="PSMA"
/codon_start=3
/product="FOLH1 protein"
/protein_id="AAI08720.1"
/db_xref="GeneID:2346"
/db_xref="HGNC:HGNC:3788"
/db_xref="IMGT/GENE-DB:3788"
/db_xref="MIM:600934"
/translation="IPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLLSYPNKT
HPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLVYVNYAR
TEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPGV
KSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPI
GYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHSTNEVTRI
YNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPR
RTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMY
SLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLG
IASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFEL
ANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASK
FSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGE
SFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA"
BASE COUNT 672 a 396 c 495 g 587 t
ORIGIN
1 agataccaca tttagcagga acagaacaaa actttcagct tgcaaagcaa attcaatccc
61 agtggaaaga atttggcctg gattctgttg agctagctca ttatgatgtc ctgttgtcct
121 acccaaataa gactcatccc aactacatct caataattaa tgaagatgga aatgagattt
181 tcaacacatc attatttgaa ccacctcctc caggatatga aaatgtttcg gatattgtac
241 cacctttcag tgctttctct cctcaaggaa tgccagaggg cgatctagtg tatgttaact
301 atgcacgaac tgaagacttc tttaaattgg aacgggacat gaaaatcaat tgctctggga
361 aaattgtaat tgccagatat gggaaagttt tcagaggaaa taaggttaaa aatgcccagc
421 tggcaggggc caaaggagtc attctctact ccgaccctgc tgactacttt gctcctgggg
481 tgaagtccta tccagacggt tggaatcttc ctggaggtgg tgtccagcgt ggaaatatcc
541 taaatctgaa tggtgcagga gaccctctca caccaggtta cccagcaaat gaatatgctt
601 ataggcgtgg aattgcagag gctgttggtc ttccaagtat tcctgttcat ccaattggat
661 actatgatgc acagaagctc ctagaaaaaa tgggtggctc agcaccacca gatagcagct
721 ggagaggaag tctcaaagtg ccctacaatg ttggacctgg ctttactgga aacttttcta
781 cacaaaaagt caagatgcac atccactcta ccaatgaagt gacgagaatt tacaatgtga
841 taggtactct cagaggagca gtggaaccag acagatatgt cattctggga ggtcaccggg
901 actcatgggt gtttggtggt attgaccctc agagtggagc agctgttgtt catgaaattg
961 tgaggagctt tggaacactg aaaaaggaag ggtggagacc tagaagaaca attttgtttg
1021 caagctggga tgcagaagaa tttggtcttc ttggttctac tgagtgggca gaggagaatt
1081 caagactcct tcaagagcgt ggcgtggctt atattaatgc tgactcatct atagaaggaa
1141 actacactct gagagttgat tgtacaccgc tgatgtacag cttggtacac aacctaacaa
1201 aagagctgaa aagccctgat gaaggctttg aaggcaaatc tctttatgaa agttggacta
1261 aaaaaagtcc ttccccagag ttcagtggca tgcccaggat aagcaaattg ggatctggaa
1321 atgattttga ggtgttcttc caacgacttg gaattgcttc aggcagagca cggtatacta
1381 aaaattggga aacaaacaaa ttcagcggct atccactgta tcacagtgtc tatgaaacat
1441 atgagttggt ggaaaagttt tatgatccaa tgtttaaata tcacctcact gtggcccagg
1501 ttcgaggagg gatggtgttt gagctagcca attccatagt gctccctttt gattgtcgag
1561 attatgctgt agttttaaga aagtatgctg acaaaatcta cagtatttct atgaaacatc
1621 cacaggaaat gaagacatac agtgtatcat ttgattcact tttttctgca gtaaagaatt
1681 ttacagaaat tgcttccaag ttcagtgaga gactccagga ctttgacaaa agcaacccaa
1741 tagtattaag aatgatgaat gatcaactca tgtttctgga aagagcattt attgatccat
1801 tagggttacc agacaggcct ttttataggc atgtcatcta tgctccaagc agccacaaca
1861 agtatgcagg ggagtcattc ccaggaattt atgatgctct gtttgatatt gaaagcaaag
1921 tggacccttc caaggcctgg ggagaagtga agagacagat ttatgttgca gccttcacag
1981 tgcaggcagc tgcagagact ttgagtgaag tagcctaaga ggatttttta gagaatccgt
2041 attgaatttg tgtggtatgt cactcagaaa gaatcgtaat gggtatattg ataaatttta
2101 aaattggtat atttgaaata aagttgaata ttaaaaaaaa aaaaaaaaaa
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