LOCUS BC108701 1098 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone
MGC:131844 IMAGE:6144255), complete cds.
ACCESSION BC108701
VERSION BC108701.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1098)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1098)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38373691.
FEATURES Location/Qualifiers
source 1..1098
/db_xref="H-InvDB:HIT000339105"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131844 IMAGE:6144255"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1098
/gene="H3F3B"
/gene_synonym="H3.3B"
/gene_synonym="H3F3A"
/db_xref="GeneID:3021"
/db_xref="HGNC:HGNC:4765"
/db_xref="MIM:601058"
CDS 97..507
/gene="H3F3B"
/gene_synonym="H3.3B"
/gene_synonym="H3F3A"
/codon_start=1
/product="H3 histone, family 3B (H3.3B)"
/protein_id="AAI08702.1"
/db_xref="GeneID:3021"
/db_xref="HGNC:HGNC:4765"
/db_xref="MIM:601058"
/translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP
GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
BASE COUNT 306 a 219 c 277 g 296 t
ORIGIN
1 ggtttttcgc tcgtcgactg cggctcttcc tcgggcagcg gaagcggcgc ggcggtcgga
61 gaagtggcct aaaacttcgg cgttgggtga aagaaaatgg cccgaaccaa gcagactgct
121 cgtaagtcca ccggtgggaa agccccccgc aaacagctgg ccacgaaagc cgccaggaaa
181 agcgctccct ctaccggcgg ggtgaagaag cctcatcgct acaggcccgg gaccgtggcg
241 cttcgagaga ttcgtcgtta tcagaagtcg accgagctgc tcatccggaa gctgcccttc
301 cagaggttgg tgagggagat cgcgcaggat ttcaaaaccg acctgaggtt tcagagcgca
361 gccatcggtg cgctgcagga ggctagcgaa gcgtacctgg tgggtctgtt cgaagatacc
421 aacctgtgtg ccatccacgc taagagagtc accatcatgc ccaaagacat ccagttggct
481 cgccggatac ggggagagag agcttaagtg aaggcagttt ttatggcgtt ttgtagtaaa
541 ttctgtaaaa tactttggtt taatttgtga ctttttttgt aagaaattgt ttataatatg
601 ttgcatttgt acttaagtca ttccatcttt cactcaggat gaatgcgaaa agtgactgtt
661 cacagacctc agtgatgtga gcactgttgc tcaggagtga caagttgcta atatgcagaa
721 gggatgggtg atacttcttg cttctcatga tgcatgtttc tgtatgttaa tgacttgttg
781 ggtagctatt aaggtactag agttgataaa tgtgtacagg gtccttttgc aataaaactg
841 gttatgactt gatccaagtg tttaacaatt ggggctgtta agtctgacca tacatcactg
901 tgatagaatg tgggcttttt caagggtgaa gatacaagtc ttaaccacag tgtaacttac
961 agtttccttt aaaaaaaaaa aaagtaaacc tggcagctat agaatacact atgtgcattt
1021 ataatagcta ttttatatat tgtagtatca acatttttaa attaaatgtt ttacattcaa
1081 aaaaaaaaaa aaaaaaaa
//