LOCUS BC108699 1651 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens 5'-nucleotidase domain containing 1, mRNA (cDNA clone
MGC:131837 IMAGE:6061738), complete cds.
ACCESSION BC108699
VERSION BC108699.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1651)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1651)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: k Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38570155.
FEATURES Location/Qualifiers
source 1..1651
/db_xref="H-InvDB:HIT000339103"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131837 IMAGE:6061738"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1651
/gene="NT5DC1"
/gene_synonym="C6orf200"
/gene_synonym="LP2642"
/gene_synonym="MGC24302"
/db_xref="GeneID:221294"
/db_xref="HGNC:HGNC:21556"
CDS 53..1420
/gene="NT5DC1"
/gene_synonym="C6orf200"
/gene_synonym="LP2642"
/gene_synonym="MGC24302"
/codon_start=1
/product="5'-nucleotidase domain containing 1"
/protein_id="AAI08700.1"
/db_xref="GeneID:221294"
/db_xref="HGNC:HGNC:21556"
/translation="MAQHFSLAACDVVGFDLDHTLCRYNLPESAPLIYNSFAQFLVKE
KGYDKELLNVTPEDWDFCCKGLALDLEDGNFLKLANNGTVLRASHGTKMMTPEVLAEA
YGKKEWKHFLSDTGMACRSGKYYFYDNYFDLPGALLCARVVDYLTKLNNGQKTFDFWK
DIVAAIQHNYKMSAFKENCGIYFPEIKRDPGRYLHSCPESVKKWLRQLKNAGKILLLI
TSSHSDYCRLLCEYILGNDFTDLFDIVITNALKPGFFSHLPSQRPFRTLENDEEQEAL
PSLDKPGWYSQGNAVHLYELLKKMTGKPEPKVVYFGDSMHSDIFPARHYSNWETVLIL
EELRGDEGTRSQRPEESEPLEKKGKYEGPKAKPLNTSSKKWGSFFIDSVLGLENTEDS
LVYTWSCKRISTYSTIAIPSIEAIAELPLDYKFTRFSSSNSKTAGYYPNPPLVLSSDE
TLISK"
BASE COUNT 527 a 334 c 344 g 446 t
ORIGIN
1 gctccttgca cccttcgcgg ccgaggcgct ccctggtgct ccccgcgcag ccatggctca
61 gcacttctcc ctggccgcct gcgacgtggt cggattcgac ctggaccaca ctctgtgtcg
121 ctacaacctg cccgagagcg ccccgctcat ttataatagc tttgcccagt tcctagttaa
181 ggagaaaggg tacgataagg aattgctcaa tgtgacccca gaggattggg atttctgttg
241 caaaggtttg gcattggatc tagaagatgg gaacttcctt aaacttgcaa ataatggcac
301 tgttctcagg gcaagccatg gcaccaagat gatgactcca gaggtgctgg cagaggcata
361 tggcaagaaa gagtggaagc acttcttgtc ggacactgga atggcttgcc gctcaggaaa
421 gtattacttt tacgacaact actttgacct gccaggagct cttctgtgtg ccagggtggt
481 ggactattta acaaaactga acaatggtca aaaaacattt gatttttgga aggatatagt
541 tgctgctata caacacaatt ataaaatgtc agcttttaag gaaaactgtg gaatatattt
601 tccagaaata aaaagagatc caggcagata tttacatagt tgtcctgaat ctgtgaaaaa
661 atggcttcga cagctaaaga atgctgggaa aattcttctg ttaattacca gttctcacag
721 tgattactgt agacttctct gcgaatatat tcttgggaat gattttacag acctttttga
781 cattgtgatt acaaatgcat tgaagcctgg tttcttctcc cacttaccaa gtcagagacc
841 tttccggaca ctcgagaatg atgaggagca ggaggcactg ccatctctgg ataaacctgg
901 ctggtactcc caagggaacg ctgtccacct ctatgaactt ctgaagaaaa tgactggcaa
961 acctgaaccc aaggttgttt attttggtga cagcatgcat tcagatattt tcccagctcg
1021 tcactatagt aattgggaga cagtcctcat cctggaagaa ctcagagggg atgaaggcac
1081 gaggagtcag aggcctgagg agtcagagcc tctagagaag aaaggaaaat atgagggacc
1141 aaaagcaaaa cctttaaata cttcatctaa aaaatggggc tcttttttta ttgattcagt
1201 tttgggactg gaaaatacag aagactcctt ggtttataca tggtcttgta agagaatcag
1261 tacttacagc actattgcaa ttccaagtat tgaagcaatc gcagaattac ctctggacta
1321 caaatttaca agattctctt caagcaattc aaaaacagct ggctactatc caaatcctcc
1381 actggtctta tcaagtgatg agacactgat atccaaataa gttgtcttta ctgaaaaatg
1441 aagtgaagac ccatatatgc agttaaaaaa aagttaattt tcaaaaaata ctgtaaaaga
1501 ctttaaggaa caagttttat tgaccaataa gttgatattt gtccataggt ctcctttcta
1561 taaatcatct tgatgtttaa caactcttat tatattaaaa tctcagtatc ctaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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