LOCUS BC108682 2500 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens cell division cycle and apoptosis regulator 1, mRNA
(cDNA clone IMAGE:6165670), partial cds.
ACCESSION BC108682
VERSION BC108682.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852387.
FEATURES Location/Qualifiers
source 1..2500
/db_xref="H-InvDB:HIT000339086"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6165670"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2500
/gene="CCAR1"
/gene_synonym="CARP-1"
/gene_synonym="CARP1"
/gene_synonym="RP11-437A18.1"
/db_xref="GeneID:55749"
/db_xref="HGNC:HGNC:24236"
CDS 68..>2500
/gene="CCAR1"
/gene_synonym="CARP-1"
/gene_synonym="CARP1"
/gene_synonym="RP11-437A18.1"
/codon_start=1
/product="CCAR1 protein"
/protein_id="AAI08683.1"
/db_xref="GeneID:55749"
/db_xref="HGNC:HGNC:24236"
/translation="MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQ
QTALAAAGLTTQTPANYQLTQTAALQQQAAAAAAALQQQYSQPQQALYSVQQQLQQPQ
QTLLTQPAVALPTSLSLSTPQPTAQITVSYPTPRSSQQQTQPQKQRVFTGVVTKLHDT
FGFVDEDVFFQLSAVKGKTPQVGDRVLVEATYNPNMPFKWNAQRIQTLPNQNQSQTQP
LLKTPPAVLQPIAPQTTFGVQTQPQPQSLLQAQISAASITPLLQTQPQPLLQQPQQKA
GLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERERERRRSRERSP
QRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQNLYIPS
DFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNMAILDPPDADHLYSAKVM
LMASPSMEDLYHKSCALAEDPQELRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSL
DGPDPEKDPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHV
ETVVLFFPDVWHCLPTRSEWETLSRGYKQQLVEKLQGERKEADGEQDEEEKDDGEAKE
ISTPTHWSKLDPKTMKVNDLRKELESRALSSKGLKSQLIARLTKQLKVEEQKEEQKEL
EKSEKEEDEDDDRKSEDDKEEEERKRQEEIERQRRERRYILPDEPAIIVHPNWAAKSG
KFDCSIMSLSVLLDYRLEDNKEHSFEVSLFAELFNEMLQRDFGVRIYKSLLSLPEKED
KKEKDKKSKKKKK"
BASE COUNT 801 a 552 c 554 g 593 t
ORIGIN
1 gccgggaccc gactcagatc gatgctatag aagacaaaca agggaaggtt ttttttcctt
61 ttgcatcatg gctcaatttg gaggacagaa gaatccgcca tgggctactc agtttacagc
121 cactgcagta tcacagccag ctgcactggg tgttcaacag ccatcactcc ttggagcatc
181 tcctaccatt tatacacagc aaactgcatt ggcagcagca ggccttacca cacaaactcc
241 agcaaactat cagttaacac aaactgctgc attgcagcaa caagccgcag ctgcagcagc
301 tgcattacaa cagcaatatt cacaacctca gcaggccctg tatagtgtgc aacaacagtt
361 acagcaaccc cagcaaaccc tcttaacaca gccagctgtt gcactgccta caagccttag
421 cctgtctact cctcagccaa cagcacaaat aactgtatca tatccaacac caaggtccag
481 tcaacagcaa acccagcctc agaagcagcg tgttttcaca ggggtggtta caaaactaca
541 tgatacattt ggatttgtgg atgaagatgt attctttcag cttagtgctg tcaaagggaa
601 aaccccccaa gtaggtgaca gagtattggt tgaagctact tataatccta atatgccttt
661 taaatggaat gcacagagaa ttcaaacact accaaatcag aatcagtcgc aaacccagcc
721 attactgaag actcctcctg ctgtacttca gccaattgca ccacagacaa catttggtgt
781 tcagactcag ccccagcccc agtcactgct gcaggcacag atttcagcag cttctattac
841 accactattg cagactcaac cacagccctt attacagcag cctcagcaaa aagctggttt
901 attgcagcct cctgttcgta tagtttcaca gccacaaccg gcacgacgat tagatccccc
961 atcccgattt tcaggaagaa atgacagagg ggatcaagtg cctaacagaa aagatgatcg
1021 aagtcgtgag agagagagag aaagacgtag atcgagagaa agatcacctc agaggaaacg
1081 ttcccgggaa agatctccac gaagagagcg agagcgatca cctcggagag ttcgacgtgt
1141 tgttccacgt tacacagttc agttttcaaa gttttcttta gattgtccca gttgtgacat
1201 gatggaacta aggcgccgtt atcaaaattt gtatatacct agtgactttt ttgatgctca
1261 atttacatgg gtggatgctt tccctttgtc aagaccattt cagctgggaa attactgcaa
1321 tttttatgta atgcacagag aagtagagtc cttagaaaaa aatatggcca ttcttgatcc
1381 accagatgct gaccacttat acagtgcaaa ggtaatgctg atggctagcc ctagtatgga
1441 agatttatat cataagtcat gtgctcttgc tgaggaccca caagaacttc gagatggatt
1501 ccaacatcct gctagacttg ttaagttttt agtgggcatg aaaggcaagg atgaagctat
1561 ggccattgga ggccactggt ctccttcgtt ggatggacca gacccagaaa aagatccctc
1621 tgtgttgatt aagactgcta ttcgttgttg taaggctctg acaggcattg atctaagtgt
1681 gtgcacacaa tggtaccgtt ttgcagagat tcgctaccat cgccctgagg agacccacaa
1741 ggggcgtaca gttccagctc atgtggagac agtggtttta tttttcccgg atgtttggca
1801 ttgccttccc acccgctcag agtgggaaac cctctcccga ggatacaagc agcagctggt
1861 cgagaagctt cagggtgaac gcaaggaggc tgatggagaa caggatgaag aagagaagga
1921 tgatggtgaa gctaaagaaa tttctacacc tacccattgg tctaaacttg atccaaagac
1981 aatgaaggta aatgacctcc gaaaagaatt agaaagtcga gctcttagtt ccaaaggatt
2041 aaaatcccag ttaatagccc gattgacaaa acagcttaaa gtagaggaac aaaaagaaga
2101 acagaaggag ttagagaaat ctgaaaaaga agaggatgag gatgatgata ggaaatctga
2161 agacgataaa gaggaagaag aaaggaaacg tcaagaggaa atagaacgcc agcgtcgaga
2221 aagaagatat attttgcctg atgaaccggc catcattgta catccaaatt gggctgcaaa
2281 aagtggcaag tttgattgta gcatcatgtc tttgagtgtc ctattggact acagattaga
2341 ggataataaa gaacattcat ttgaggtttc attgtttgcg gaacttttca acgaaatgct
2401 tcaaagagat tttggtgtcc gtatatacaa atcattactg tctcttcctg agaaagagga
2461 caaaaaagaa aaggataaaa aaagcaaaaa aaaaaaaaaa
//