LOCUS BC108669 1609 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens kelch domain containing 5, mRNA (cDNA clone MGC:131714
IMAGE:6173072), complete cds.
ACCESSION BC108669
VERSION BC108669.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1609)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1609)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749725.
FEATURES Location/Qualifiers
source 1..1609
/db_xref="H-InvDB:HIT000339073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131714 IMAGE:6173072"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1609
/gene="KLHDC5"
/gene_synonym="KIAA1340"
/db_xref="GeneID:57542"
/db_xref="HGNC:HGNC:29252"
CDS 49..1566
/gene="KLHDC5"
/gene_synonym="KIAA1340"
/codon_start=1
/product="kelch domain containing 5"
/protein_id="AAI08670.1"
/db_xref="GeneID:57542"
/db_xref="HGNC:HGNC:29252"
/translation="MSAEEMVQIRLEDRCYPVSKRKLIEQSDYFRALYRSGMREALSQ
EAGGPEVQQLRGLSAPGLRLVLDFINAGGAREGWLLGPRGEKGGGVDEDEEMDEVSLL
SELVEAASFLQVTSLLQLLLSQVRLNNCLEMYRLAQVYGLPDLQEACLRFMVVHFHEV
LCKPQFHLLGSPPQAPGDVSLKQRLREARMTGTPVLVALGDFLGGPLAPHPYQGEPPS
MLRYEEMTERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHSYNP
STNEWLQVASMNQKRSNFKLVAVNSKLYAIGGQAVSNVECYNPEQDAWNFVAPLPNPL
AEFSACECKGKIYVIGGYTTRDRNMNILQYCPSSDMWTLFETCDVHIRKQQMVSVEET
IYIVGGCLHELGPNRRSSQSEDMLTVQSYNTVTRQWLYLKENTSKSGLNLTCALHNDG
IYIMSRDVTLSTSLEHRVFLKYNIFSDSWEAFRRFPAFGHNLLVSSLYLPNKAET"
BASE COUNT 337 a 478 c 475 g 319 t
ORIGIN
1 cccacgcgtc cgctggcggt gagcgctgcc gccccggggc ccccagccat gtcggccgag
61 gagatggtgc agatccgcct ggaggaccgc tgctacccgg tgagcaagag gaagctcatc
121 gagcagagcg actacttccg cgccctctac cgctccggca tgcgcgaggc cctgagccag
181 gaggccggcg gcccggaggt gcagcagctg cgcggcctca gcgcgccggg cctgcggctg
241 gtactggact tcatcaacgc cggcggggcc cgcgaaggct ggctcctggg cccgcgcggg
301 gaaaagggcg gcggggtgga cgaggacgag gagatggatg aggtgagcct gctgtccgag
361 ctggtggagg cggcctcctt cctgcaggtc acgtccctgc tgcagctgct gctgtcccag
421 gtgcggctca ataactgcct ggagatgtac cgcctggcgc aggtgtacgg gctgcccgac
481 ctgcaggagg cctgcctgcg cttcatggtc gtccacttcc acgaggtgct gtgcaagccc
541 cagttccacc tcctggggtc tcctccccaa gctccagggg atgtcagcct gaagcagagg
601 ctgagggagg cccggatgac tgggactcct gtcctcgtgg ccctcgggga cttcctgggg
661 ggacccctgg cccctcaccc ctaccagggg gagcccccgt ccatgctcag gtacgaggag
721 atgactgagc gttggttccc gctggccaac aaccttcctc ccgacctggt caatgtcagg
781 ggctatgggt ctgccatcct ggacaactac ctcttcatag tgggcgggta caggatcact
841 agccaggaga tctccgctgc gcattcctac aaccccagca ccaacgagtg gctccaggtg
901 gcctccatga accagaagag gtctaacttc aaacttgtgg ctgttaattc aaaactctat
961 gccatcggag ggcaggccgt ttctaacgtt gagtgttaca accccgagca ggatgcgtgg
1021 aattttgtgg cgcccttacc caatcctctg gctgagttct ctgcctgtga gtgtaaggga
1081 aaaatttatg tcattggagg atacactacc agagaccgga acatgaacat tttgcagtac
1141 tgcccctctt ccgacatgtg gacgctcttt gaaacatgtg acgtccacat tcgcaagcag
1201 cagatggtgt ctgtggaaga gaccatctac atcgtggggg ggtgtctcca cgagctgggg
1261 cccaaccgca ggagcagcca gagcgaggac atgctcaccg tgcagtccta caacaccgtc
1321 acccgccagt ggctctacct caaggagaac acgtccaaat cgggtcttaa cttgacttgt
1381 gcgctccata acgacggcat ctacatcatg agcagagacg tcaccctgtc gaccagcttg
1441 gaacaccgag tgttcctcaa gtacaacatc ttttcagata gttgggaagc atttcggcgt
1501 tttccagctt ttggacataa cttgctggtt tcttctcttt atctgcccaa taaagcagaa
1561 acatgactga attgaattgg tagatgaaaa aaaaaaaaaa aaaaaaaaa
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