LOCUS BC108649 1261 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens jumonji domain containing 1C, mRNA (cDNA clone
IMAGE:6069106), with apparent retained intron.
ACCESSION BC108649
VERSION BC108649.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1261)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1261)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68342035
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1261
/db_xref="H-InvDB:HIT000339054"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6069106"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 423 a 252 c 261 g 325 t
ORIGIN
1 ctcgttctca tttgggtgtc tgcactgttg gaagctactg cactgtgttt ccacgcagac
61 agagtacagt gggaaaggct ttctccagct gatggatggc tgttctcttt atttggagta
121 tcttactggt tatgtaagcg acctcgagag aaattatcct gacccagatc ggaggatgca
181 gtagtgcttc agctgcagga tttcttagtc gttaacacca cagtgctgat gacaaagagc
241 gagttgtaat cctcatcact gccagggctg agccagagca gacagaaaat cgtcatttgc
301 tcgttggaga cttgttaggt tacagctcct gcttcgttct gtggtcttgg cttttcttcc
361 tatacaatga cgccgctgca agtgagctca gaaatgcttg gtttgagagc catttgcctg
421 tgatttttga agactaaaga agtatttaca ctagatactc ttccagaaca aaatagaaat
481 ttcagcaaat acttactgac ctttaaagcc ttgttgtgga tttctgagat ttaaagatac
541 tttaaaattc tcaagaacaa aactttcaaa cctctggttg aaagaaatat acccagttca
601 gtcactgcag tagaattcct tgtagataag caactggatt ttttaactga agatagtgcc
661 tttcagccct accaggtcct tattccttaa atggatacag agtgagagta tatagacaag
721 actctgccac ccagtggttt actggcataa ttactcatca tgatctcttc acccgcacca
781 tgatcgttat gaatgatcag gtgaaaatat tggcattaca tcacgacgca ggtctcgtgc
841 caatcaaaac gtcaacgctg ttcacagcca ttatacacgt gcccaagcaa atagtcccag
901 accagcaatg aactcccaag ctgctgtacc aaaacagaat acacaccagc aacagcaaca
961 aagaagtatc cgtccaaata agaggaaggg ctcagatagc agtataccag atgaagagaa
1021 gatgaaggag gaaaaatatg attatatatc acgaggagaa aatcctaaag gtaaaaacaa
1081 acacttgatg aataaaagaa ggaaacctga ggaggatgaa aagaaactaa atatgaaaag
1141 acttcgaact gacaatgttt cagacttttc tgagagcagt gactcagaaa attcaaataa
1201 gagaataata gataattcct cagaacagaa gccagagaat gaattgaaaa aaaaaaaaaa
1261 a
//