LOCUS BC108648 1559 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens mitochondrial transcription termination factor, mRNA
(cDNA clone MGC:131634 IMAGE:6526378), complete cds.
ACCESSION BC108648
VERSION BC108648.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1559)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1559)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68448540.
FEATURES Location/Qualifiers
source 1..1559
/db_xref="H-InvDB:HIT000339053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131634 IMAGE:6526378"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1559
/gene="MTERF"
/db_xref="GeneID:7978"
/db_xref="HGNC:HGNC:21463"
/db_xref="MIM:602318"
CDS 53..1252
/gene="MTERF"
/codon_start=1
/product="mitochondrial transcription termination factor"
/protein_id="AAI08649.1"
/db_xref="GeneID:7978"
/db_xref="HGNC:HGNC:21463"
/db_xref="MIM:602318"
/translation="MQSLSLGQTSISKGLNYLTIMAPGNLWHMRNNFLFGSRCWMTRF
SAENIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMIT
NEQDLKMFLLSKGASKEVIASIISRYPRAITRTPENLSKRWDLWRKIVTSDLEIVNIL
ERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFL
QAAGLSLGHNDPADFVRKIIFKNPFILIQSTKRVKANIEFLRSTFNLNSEELLVLICG
PGAEILDLSNDYARRSYANIKEKLFSLGCTEEEVQKFVLSYPDVIFLAEKKFNDKIDC
LMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNITLLSWSKKRYEAKL
KKLSRFA"
BASE COUNT 516 a 263 c 339 g 441 t
ORIGIN
1 cagtggatgg gtgcagttca ggagatagct gttctccagc ctttctggag ggatgcagag
61 cctttcctta ggacaaacaa gcatttcaaa aggtttgaac tacctaacca ttatggcacc
121 aggaaacctc tggcatatga gaaataactt tctctttggt tcaagatgtt ggatgactcg
181 attttcagca gaaaacatct tcaaatcagt ttcatttagg ctttttggtg tgaagtgtca
241 taatacagac agtgagcctt tgaaaaatga ggacctactg aaaaacttac ttactatggg
301 agtagatatt gacatggcaa ggaaacgaca gcctggagtt tttcatagga tgattaccaa
361 tgagcaggac ctgaagatgt tccttctttc caaaggagct agcaaagaag tgatcgctag
421 catcatatca agatatccac gagcaataac acgtactccc gagaatcttt caaaacggtg
481 ggatctgtgg agaaagattg tgacatcaga ccttgaaatt gtaaatattt tggaacgttc
541 tcctgaatcc ttttttcggt ccaataacaa cctaaactta gagaataata taaagttcct
601 ctactcagtt ggattgaccc gtaaatgcct ttgtcgattg ttgaccaatg cccctcgtac
661 cttctccaat agtcttgatc tgaataaaca gatggttgaa tttttgcagg cagccggttt
721 gtcattgggt cacaatgatc ccgcagattt tgtcagaaag ataattttta aaaacccttt
781 tatcttaatt cagagcacca agcgggtgaa agctaacatt gaattcttac ggtcaacttt
841 caatttgaac agtgaggaac tgctggttct gatatgtggt ccaggagctg aaatcctaga
901 cctttccaat gactatgcca gaagaagcta cgcaaacatc aaagagaagc tgttttctct
961 tggatgtact gaagaagagg tacagaagtt tgtcttaagc tatccagatg tgatcttctt
1021 ggcagagaaa aagtttaatg ataaaataga ctgcctcatg gaagaaaaca ttagcatttc
1081 acaaataatc gaaaatcctc gggttctgga ttcaagcata agtactttaa aaagtcgaat
1141 caaagaattg gtaaatgctg gctgtaactt gagtacttta aacatcactc ttctatcttg
1201 gagtaaaaaa agatatgaag ctaaattgaa aaagttaagc agatttgcct aaggatgcca
1261 atgtttttaa ttctcaggaa ctgtgaatat gttatgccac attgcaaaag aattttgcag
1321 aagtgattaa tttaaaatgt tattaagggc cttgagatgg ggagattatc ctgaattact
1381 ttggagggcc taatataatt gtagggatct ttaaaagttg aagagggagg caaaagagga
1441 ggtcagagtg atcctgtata agaaagacaa ctacttttga aggaagttaa aaggtggctt
1501 tgaaggagga agacaccttg agccaaggaa tgaagggggc ctgtaaaaaa aaaaaaaaa
//