LOCUS BC108322 2178 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class V, type 10B, mRNA (cDNA clone
IMAGE:3048848), partial cds.
ACCESSION BC108322
VERSION BC108322.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2178)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2178)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 217 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2178
/db_xref="H-InvDB:HIT000339049"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3048848"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2178
/gene="ATP10B"
/gene_synonym="ATPVB"
/db_xref="GeneID:23120"
/db_xref="HGNC:HGNC:13543"
CDS <1..1671
/gene="ATP10B"
/gene_synonym="ATPVB"
/codon_start=1
/product="ATP10B protein"
/protein_id="AAI08323.1"
/db_xref="GeneID:23120"
/db_xref="HGNC:HGNC:13543"
/translation="GQVFFLSNDLDLYDEETDLSIQCRALNIAEDLGQIQYIFSDKTG
TLTENKMVFRRCTIMGSEYSHQENAKRLETPKELDSDGEEWTQYQCLSFSARWAQDPA
TMRSQKGAQPLRRSQSARVPIQGHYRQRSMGHRESSQPPVAFSSSIEKDVTPDKNLLT
KVRDAALWLETLSDSRPAKASLSTTSSIADFFLALTICNSVMVSTTTEPRQRVTIKPS
SKALGTSLEKIQQLFQKLKLLSLSQSFSSTAPSDTDLGESLGANVATTDSDERDDASV
CSGGDSTDDGGYRSSMWDQGDILESGSGTSLEEALEAPATDLARPEFCYEAESPDEAA
LVHAAHAYSFTLVSRTPEQVTVRLPQGTCLTFSLLCTLGFDSVRKRMSVVVRHPLTGE
IVVYTKGADSVIMDLLEDPACVPDINMEKKLRKIRARTQKHLDLYARDGLRTLCIAKK
VVSEEDFRRWASFRREAEASLDNRDELLMETAQHLENQLTLLGATGIEDRLQEGVPDT
IATLREAGIQLWVLTGDKQETAVNIAHSCRLLNQTDTVYTINTENQVR"
BASE COUNT 566 a 585 c 543 g 484 t
ORIGIN
1 gggcaagtgt tcttcttgag caatgacctt gacctgtatg atgaagagac cgatttatcc
61 attcaatgtc gagccctcaa catcgcagag gacttgggcc agatccagta catcttctcc
121 gataagacgg ggaccctgac agagaacaag atggtgttcc gacgttgcac catcatgggc
181 agcgagtatt ctcaccaaga aaatgctaag cgactggaga ccccaaagga gctggactca
241 gatggtgaag agtggaccca ataccaatgc ctgtccttct cggctagatg ggcccaggat
301 ccagcaacta tgagaagcca aaaaggtgct cagcctctga ggaggagcca gagtgcccgg
361 gtgcccatcc agggccacta ccggcaaagg tctatggggc accgtgaaag ctcacagcct
421 cctgtggcct tcagcagctc catagaaaaa gatgtaactc cagataaaaa cctactgacc
481 aaggttcgag atgctgccct gtggttggag accttgtcag acagcagacc tgccaaggct
541 tccctctcca ccacctcctc cattgctgat ttcttccttg ccttaaccat ctgcaactct
601 gtcatggtgt ccacaaccac cgagcccagg cagagggtca ccatcaaacc ctcaagcaag
661 gctctgggga cgtccctgga gaagattcag cagctcttcc agaagttgaa gctattgagc
721 ctcagccagt cattctcatc cactgcaccc tctgacacag acctcgggga gagcttaggg
781 gccaacgtgg ccaccacaga ctcggatgag agagatgatg catctgtgtg cagtggaggt
841 gactccactg atgacggtgg ctacaggagc agcatgtggg accagggcga catcctggag
901 tctgggtcag gcacttcctt ggaggaggca ttggaggccc cagccacaga cctggccagg
961 cctgagttct gttacgaggc tgagagccct gatgaggccg ccctggtgca cgctgcccat
1021 gcctacagct tcacactagt gtcccggaca cctgagcagg tgactgtgcg cctgccccag
1081 ggcacctgcc tcaccttcag cctcctctgc accctgggct ttgactctgt caggaagaga
1141 atgtctgtgg ttgtgaggca cccactgact ggcgagattg ttgtctacac caagggtgct
1201 gactcggtca tcatggacct gctggaagac ccagcctgcg tacctgacat taatatggaa
1261 aagaagctga gaaaaatccg agcccggacc caaaagcatc tagacttgta tgcaagagat
1321 ggcctgcgca cactatgcat tgccaagaag gttgtaagcg aagaggactt ccggagatgg
1381 gccagtttcc ggcgtgaggc tgaggcatcc ctcgacaacc gagatgagct tctcatggaa
1441 actgcacagc atctggagaa tcaactcacc ttacttggag ccactgggat cgaagaccgg
1501 ctgcaggaag gagttccaga tacgattgcc actctgcggg aggctgggat ccagctctgg
1561 gtcctgactg gagataagca ggagacagcg gtcaacattg cccattcctg cagactgtta
1621 aatcagaccg acactgttta taccatcaat acagagaatc aggtgaggtg attctctgta
1681 ttgatatctg cagatatcaa cgtgtagagc aacccctcaa ccaagaggac acaggcttct
1741 aggtgggatt tgggtacacc agggaagcac ccaaccccca acagatcact gaatcttgga
1801 gtctagagga ccctggaagt catccagccc aatatccttt atctcatccc cacacatggc
1861 tagctggtct cttttacatt acttctggca ctgcttgtta gaaagtttta cctctcccaa
1921 attctactat tggtctagtc tccccatttc cccacagata aggaaactga agactactgg
1981 ggctaagtct cttgctcagg tttaccctgc ttatttctga taggtagaac taagtctaga
2041 actgagctag tgctatttac attctaccac actgtttgct tatggaaact caactgtcgg
2101 tttcttacta tttaagacta acttatccat tgaaaaagtc ccaattaaat tgaaattatt
2161 cagaaaaaaa aaaaaaaa
//