LOCUS BC108319 2833 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 3,
77kDa, mRNA (cDNA clone MGC:117398 IMAGE:6197136), complete cds.
ACCESSION BC108319
VERSION BC108319.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2833)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2833)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557494.
FEATURES Location/Qualifiers
source 1..2833
/db_xref="H-InvDB:HIT000339047"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117398 IMAGE:6197136"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2833
/gene="CSTF3"
/gene_synonym="CSTF-77"
/db_xref="GeneID:1479"
/db_xref="HGNC:HGNC:2485"
/db_xref="MIM:600367"
CDS 141..2294
/gene="CSTF3"
/gene_synonym="CSTF-77"
/codon_start=1
/product="cleavage stimulation factor, 3' pre-RNA, subunit
3, 77kDa"
/protein_id="AAI08320.1"
/db_xref="GeneID:1479"
/db_xref="HGNC:HGNC:2485"
/db_xref="MIM:600367"
/translation="MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQN
QPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWK
CYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYA
ENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARR
VAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRV
MFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST
LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIK
SGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAY
IDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRR
FTAFKEEYEGKETALLVDRYKFMDLYPCSASELKALGYKDVSRAKLAAIIPDPVVAPS
IVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLP
PPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIITGGAPELAVEGNGPVESNAVLTK
AVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR"
BASE COUNT 913 a 501 c 636 g 783 t
ORIGIN
1 gggcggtggc gattggtgtt ggcggtctgg ctcagctggg cagggggtaa ctttactgat
61 ttgggggtgg tttttagttt aatttttctt ttctagcttc ccatcgacgg tcagtgcgca
121 cgttgtaatc agctgaggcc atgtcaggag acggagccac ggagcaggca gctgagtatg
181 tcccagagaa ggtgaagaaa gcggaaaaga aattagaaga gaatccatat gaccttgatg
241 cttggagcat tctcattcga gaggcacaga atcaacctat agacaaagca cggaagactt
301 atgaacgcct tgttgcccag ttccccagtt ctggcagatt ctggaaactg tacattgaag
361 cagagattaa agctaaaaat tatgacaagg ttgaaaagct atttcagaga tgccttatga
421 aggttttgca cattgattta tggaagtgtt atctttcata tgtccgagaa accaagggta
481 aactaccaag ttacaaagaa aaaatggctc aagcatatga ctttgcactg gataaaattg
541 gaatggaaat tatgtcctat cagatttggg tggattacat caatttccta aaaggcgtgg
601 aagctgtagg atcttatgca gaaaatcaaa gaataacagc tgtccgaaga gtttatcaac
661 gaggttgtgt taatccgatg atcaacattg aacagctctg gagagactat aacaagtatg
721 aagagggtat caatattcat ttagctaaaa aaatgattga agatcggagt agagattata
781 tgaatgctag acgtgtagca aaggaatatg agacagtaat gaaaggcttg gaccgtaatg
841 ctccctcggt gcctcctcag aatactcctc aagaagctca acaagtagat atgtggaaga
901 aatatataca gtgggaaaag agcaaccctc ttcgtacaga ggatcagacc cttataacaa
961 aaagagttat gtttgcttat gaacagtgcc tgcttgtgct gggccatcac cctgatattt
1021 ggtatgaagc tgcccagtat cttgagcagt caagtaaact gctcgcagaa aagggagata
1081 tgaataatgc caaattattt agtgatgaag ctgctaatat atatgaaaga gccataagca
1141 ctttattgaa gaagaatatg cttctttatt ttgcatatgc agattatgaa gagagtcgca
1201 tgaagtatga aaaggttcac agtatatata acagacttct ggcaattgag gatattgacc
1261 ctaccttggt atatatccaa tatatgaaat ttgcacggag agcagaaggc atcaaatctg
1321 gaagaatgat atttaaaaaa gcaagagaag ataccagaac ccgccaccat gtctatgtta
1381 ctgcagcact catggaatat tactgtagta aggacaaatc tgttgccttt aagatttttg
1441 agctggggct aaaaaaatat ggagacattc cagagtatgt cctggcctat attgactatc
1501 tttctcacct caatgaggac aataataccc gagttttgtt tgaacgagtt ttaacatctg
1561 gaagccttcc tcctgagaag tctggagaaa tctgggcccg atttctagca tttgaaagta
1621 atattggtga tctagctagt atactcaaag tggagaaaag acggtttaca gcattcaaag
1681 aagagtatga agggaaagaa acggctttac tagtagatag atacaagttc atggatttat
1741 atccttgctc tgcaagtgaa ttaaaagcac ttggttataa ggatgtctcc cgtgctaagc
1801 tagcagctat aattccggac ccagttgtag ctccttctat agtgcctgtt ctgaaagatg
1861 aagtggatag aaaaccagaa taccctaaac cagacactca gcagatgatt ccatttcagc
1921 cacgacattt agcacctcca ggtttacacc ctgtacctgg tggagtgttc ccagtccctc
1981 ctgcagctgt tgttttaatg aaacttctcc ctcctcctat ctgtttccag ggtccttttg
2041 tacaagtgga tgaactgatg gaaattttcc gaagatgcaa gataccaaat actgttgagg
2101 aagctgtgag gatcattact ggtggggccc cagagctagc tgtagaaggc aacggccccg
2161 tggaaagtaa tgcagtactc accaaggccg tcaaaaggcc caacgaggat tcagatgaag
2221 atgaagaaaa gggagccgtt gtcccccctg ttcatgacat ttacagagca cggcagcaga
2281 agcggattcg gtagggtttt aaacgcctct gcagaaaact cctgtccagg attccttttg
2341 cctcaagtgg tatgtttaaa agagacaacg ctttgttaca aggttcttgg aaacaaagtt
2401 gtattgtcat tggtgcctct atcacatggt tcttgagaaa aaacaaacca acctgtgtga
2461 attttagaat acggaacaga cctatgctct aagcaaaatt aggttttcaa aaatgtgaga
2521 acagtacaaa gtggcagaac cacattttgt tccctcttca agggtgtctt gtatgtgccg
2581 cttgaagatt tgtgagtttt tcaacagttt tattttaaaa actggatggc ttatgattgt
2641 aaagcatttt atcacatttt ctgaaaacaa ttgttcttgg tttgcttatg tagagtcctg
2701 ccttattgtt tgtttttatt tatggcagaa tgtatgaaat ccgttttgta gtttcaaatt
2761 ttaaaagtcc tttaaaaaat aaaaggattc agaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaa
//