LOCUS BC108309 3214 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens CSE1 chromosome segregation 1-like (yeast), mRNA (cDNA
clone MGC:117283 IMAGE:4540265), complete cds.
ACCESSION BC108309
VERSION BC108309.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 217 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29029560.
FEATURES Location/Qualifiers
source 1..3214
/db_xref="H-InvDB:HIT000339038"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117283 IMAGE:4540265"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3214
/gene="CSE1L"
/gene_synonym="CAS"
/gene_synonym="CSE1"
/gene_synonym="XPO2"
/db_xref="GeneID:1434"
/db_xref="HGNC:HGNC:2431"
/db_xref="MIM:601342"
CDS 136..3051
/gene="CSE1L"
/gene_synonym="CAS"
/gene_synonym="CSE1"
/gene_synonym="XPO2"
/codon_start=1
/product="CSE1 chromosome segregation 1-like (yeast)"
/protein_id="AAI08310.1"
/db_xref="GeneID:1434"
/db_xref="HGNC:HGNC:2431"
/db_xref="MIM:601342"
/translation="MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGNQNYPL
LLLTLLEKSQDNVIKVCASVTFKNYIKRNWRIVEDEPNKICEADRVAIKANIVHLMLS
SPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRY
RHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALRILFSSLILISKL
FYSLNFQDLPEFFEDNMETWMNNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAA
LYAQKYDEEFQRYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKNLF
EDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRG
LCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQ
ANELVNLTEFFVNHILPDLKSANVNEFPVLKADGIKYIMIFRNQVPKEHLLVSIPLLI
NHLQAESIVVHTYAAHALERLFTMRGPNNATLFTAAEIAPFVEILLTNLFKALTLPGS
SENEYIMKAIMRSFSLLQEAIIPYIPTLITQLTQKLLAVSKNPSKPHFNHYMFEAICL
SIRITCKANPAAVVNFEEALFLVFTEILQNDVQEFIPYVFQVMSLLLETHKNDIPSSY
MALFPHLLQPVLWERTGNIPALVRLLQAFLERGSNTIASAAADKIPGLLGVFQKLIAS
KANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYC
IKYGALALQEIFDGIQPKMFGMVLEKIIIPEIQKVSGNVEKKICAVGITKLLTECPPM
MDTEYTKLWTPLLQSLIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEH
DPVGQMVNNPKIHLAQSLHKLSTACPGRVPSMVSTSLNAEALQYLQGYLQAASVTLL"
BASE COUNT 990 a 648 c 627 g 949 t
ORIGIN
1 ctcaggctcg ctgtcgcgcc attttgccgg ggtttgaatg tgaggcggag cggcggcagg
61 agcgggtagt gccagctacg gtccgcggct ggggttccct cctccgtttc tgtatcccca
121 cgagatccta tagcaatgga actcagcgat gcaaatctgc aaacactaac agaatattta
181 aagaaaacac ttgatcctga tcctgccatc cgacgtccag ctgagaaatt tcttgaatct
241 gttgaaggaa atcagaatta tccactgttg cttttgacat tactggagaa gtcccaggat
301 aatgttatca aagtatgtgc ttcagtaaca ttcaaaaact atattaaaag gaactggaga
361 attgttgaag atgaaccaaa caaaatttgt gaagccgatc gagtggccat taaagccaac
421 atagtgcact tgatgcttag cagcccagag caaattcaga agcagttaag tgatgcaatt
481 agcattattg gcagagaaga ttttccacag aaatggcctg acttgctgac agaaatggtg
541 aatcgctttc agagtggaga tttccatgtt attaatggag tcctccgtac agcacattca
601 ttatttaaaa gataccgtca tgaatttaag tcaaacgagt tatggactga aattaagctt
661 gttctggatg cctttgcttt gcctttgact aatcttttta aggccactat tgaactctgc
721 agtacccatg caaatgatgc ctctgccctg aggattctgt tttcttccct gatcctgatc
781 tcaaaattgt tctatagttt aaactttcag gatctccctg aattttttga agataatatg
841 gaaacttgga tgaataattt tcatactctc ttaacattgg ataataagct tttacaaact
901 gatgatgaag aggaagccgg cttattggag ctcttaaaat cccagatttg tgataatgcc
961 gcactctatg cacaaaagta cgatgaagaa ttccagcgat acctgcctcg ttttgttaca
1021 gccatctgga atttactagt tacaacgggt caagaggtta aatatgattt gttggtaagt
1081 aatgcaattc aatttctggc ttcagtttgt gagagacctc attataagaa tctatttgag
1141 gaccagaaca cgctgacaag tatctgtgaa aaggttattg tgcctaacat ggaatttaga
1201 gctgctgatg aagaagcatt tgaagataat tctgaggagt acataaggag agatttggaa
1261 ggatctgata ttgatactag acgcagggct gcttgtgatc tggtacgagg attatgcaag
1321 ttttttgagg gacctgtgac aggaatcttc tctggttatg ttaattccat gctgcaggaa
1381 tacgcaaaaa atccatctgt caactggaaa cacaaagatg cagccatcta cctagtgaca
1441 tctttggcat caaaagccca aacacagaag catggaatta cacaagcaaa tgaacttgta
1501 aacctaactg agttctttgt gaatcacatc ctccctgatt taaaatcagc taatgtgaat
1561 gaatttcctg tccttaaagc tgacggtatc aaatatatta tgatttttag aaatcaagtg
1621 ccaaaagaac atcttttagt ctcgattcct ctcttgatta atcatcttca agctgaaagt
1681 attgttgttc atacttacgc agctcatgct cttgaacggc tctttactat gcgagggcct
1741 aacaatgcca ctctctttac agctgcagaa atcgcaccgt ttgttgagat tctgctaaca
1801 aaccttttca aagctctcac acttcctggc tcttcagaaa atgaatatat tatgaaagct
1861 atcatgagaa gtttttctct cctacaagaa gccataatcc cctacatccc tactctcatc
1921 actcagctta cacagaagct attagctgtt agtaagaacc caagcaaacc tcactttaat
1981 cactacatgt ttgaagcaat atgtttatcc ataagaataa cttgcaaagc taaccctgct
2041 gctgttgtaa attttgagga ggctttgttt ttggtgttta ctgaaatctt acaaaatgat
2101 gtgcaagaat ttattccata cgtctttcaa gtgatgtctt tgcttctgga aacacacaaa
2161 aatgacatcc cgtcttccta tatggcctta tttcctcatc tccttcagcc agtgctttgg
2221 gaaagaacag gaaatattcc tgctctagtg aggcttcttc aagcattctt agaacgcggt
2281 tcaaacacaa tagcaagtgc tgcagctgac aaaattcctg ggttactagg tgtctttcag
2341 aagctgattg catccaaagc aaatgaccac caaggttttt atcttctaaa cagtataata
2401 gagcacatgc ctcctgaatc agttgaccaa tataggaaac aaatcttcat tctgctattc
2461 cagagacttc agaattccaa aacaaccaag tttatcaaga gttttttagt ctttattaat
2521 ttgtattgca taaaatatgg ggcactagca ctacaagaaa tatttgatgg tatacaacca
2581 aaaatgtttg gaatggtttt ggaaaaaatt attattcctg aaattcagaa ggtatctgga
2641 aatgtagaga aaaagatctg tgcggttggc ataaccaaat tactaacaga atgtccccca
2701 atgatggaca ctgagtatac caaactgtgg actccattat tacagtcttt gattggtctt
2761 tttgagttac ccgaagatga taccattcct gatgaggaac attttattga catagaagat
2821 acaccaggat atcagactgc cttctcacag ttggcatttg ctgggaaaaa agagcatgat
2881 cctgtaggtc aaatggtgaa taaccccaaa attcacctgg cacagtcact tcacaagttg
2941 tctaccgcct gtccaggaag ggttccatca atggtgagca ccagcctgaa tgcagaagcg
3001 ctccagtatc tccaagggta ccttcaggca gccagtgtga cactgcttta aactgcattt
3061 ttctaatggg ctaaacccag atggtttcct aggaaatcac aggcttctga gcacagctgc
3121 attaaaacaa aggaagtttt ccttttgaac ttgtcacgaa ttccatcttg taaaggatat
3181 taaatgttgc tttaacctga aaaaaaaaaa aaaa
//