LOCUS BC107901 1208 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type, 2,
mRNA (cDNA clone MGC:104215 IMAGE:6745302), complete cds.
ACCESSION BC107901
VERSION BC107901.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1208)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1208)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: p Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538463.
FEATURES Location/Qualifiers
source 1..1208
/db_xref="H-InvDB:HIT000338989"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104215 IMAGE:6745302"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1208
/gene="PSMB2"
/gene_synonym="HC7-I"
/db_xref="GeneID:5690"
/db_xref="HGNC:HGNC:9539"
/db_xref="MIM:602175"
CDS 60..665
/gene="PSMB2"
/gene_synonym="HC7-I"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, beta
type, 2"
/protein_id="AAI07902.1"
/db_xref="GeneID:5690"
/db_xref="HGNC:HGNC:9539"
/db_xref="MIM:602175"
/translation="MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILL
LCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL
LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELL
RKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPKQGS"
BASE COUNT 323 a 282 c 261 g 342 t
ORIGIN
1 gggggaagcg ggcgagtctc gtgctgtgtc ggacctgcag cccctggcct tccgccacca
61 tggagtacct catcggtatc caaggccccg actatgttct tgtcgcctcc gaccgggtgg
121 ccgccagcaa tattgtccag atgaaggacg atcatgacaa gatgtttaag atgagtgaaa
181 agatattact cctgtgtgtt ggagaggctg gagacactgt acagtttgca gaatatattc
241 agaaaaacgt gcaactttat aagatgcgaa atggatatga attgtctccc acggcagcag
301 ctaacttcac acgccgaaac ctggctgact gtcttcggag tcggacccca tatcatgtga
361 acctcctcct ggctggctat gatgagcatg aagggccagc gctgtattac atggactacc
421 tggcagcctt ggccaaggcc ccttttgcag cccacggcta tggtgccttc ctgactctca
481 gtatcctcga ccgatactac acaccgacta tctcacgtga gagggcagtg gaactcctta
541 ggaaatgtct ggaggagctc cagaaacgct tcatcctgaa tctgccaacc ttcagtgttc
601 gaatcattga caaaaatggc atccatgacc tggataacat ttccttcccc aaacagggct
661 cctaacatca tgtcctccct cccacttgcc agggaacttt tttttgatgg gctcctttat
721 ttttttctac tcttttcagg cgcactcttg ataaatggtt aattcagaat aaaggtgact
781 atggatataa ttgagccctc tggtccaggt ctcagtttac ctaatattac ctcagaaagg
841 atatggaggg aagatgatct ttttgccagg tctgactttt cttcctgctc cgccctccat
901 taacgctcag tgctgggatt acaggcgtga gccaccgtgc ccggctaaaa agtattttta
961 agttctgcat attgcttatt tcacttaaca ctatattaga gattgtttta tatcaataca
1021 tatagatatg cttattcttg ttgacagttg cataattttc cattaaattg atgtatcatg
1081 ggcagttaac cagttactcg ttttactctt agcataactt tagggaacaa tgtggatgtt
1141 ttgtggttaa agctattaaa acagtggttc ttgaccacaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaa
//