LOCUS BC107891 1197 bp mRNA linear HUM 27-JUN-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone IMAGE:6622257), partial cds.
ACCESSION BC107891
VERSION BC107891.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1197)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: l Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453590.
FEATURES Location/Qualifiers
source 1..1197
/db_xref="H-InvDB:HIT000338979"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6622257"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1197
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 325..>1197
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="SMC2 protein"
/protein_id="AAI07892.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDS
ICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEIT
VTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE
ILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYL
EYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKA
LNHEIEKKKKKKKKK"
BASE COUNT 429 a 203 c 263 g 302 t
ORIGIN
1 gggggggacc agtggcagag ggaccttagg tgatccttag aaataaaggc tagtttctgt
61 tcgaccttgg agtagggcga agaggtgtag acaggtctgg agaagcgagg taaaaccctg
121 agtaaaagca agaagttgga gaatatgaga tacatctcat ctctagtaaa tacttaaatg
181 acttcccctc ctcccggagt caagcacaat tcggggatgc agtgacggac gtaggtgaag
241 acactgcggg aacttacaga caaaactggt ttgtggcctg tttgattcct gtcagaggtt
301 tgctgaccca agacagtatc gaaaatgcat attaagtcaa ttattctaga gggattcaag
361 tcctatgctc agaggaccga agtcaatggt tttgaccccc tcttcaatgc tatcactggc
421 ttaaatggta gtgggaaatc caacatattg gactccatct gctttttgct gggcatctcc
481 aacctgtctc aggttcgggc ttctaattta caagatttag tttacaaaaa tgggcaggct
541 ggtattacca aagcctctgt gtcaatcact tttgataatt ctgacaaaaa gcaaagtcct
601 ttaggatttg aggttcatga tgaaatcaca gtaacaaggc aggtggttat tggtggtaga
661 aataaatatt taatcaatgg agtcaatgcc aacaacacca gagtacagga tctcttctgt
721 tctgttggcc ttaatgttaa caaccctcac tttctcatca tgcagggccg aattacaaaa
781 gtattgaata tgaaacctcc agagatttta tccatgatag aagaagcagc tggaaccagg
841 atgtatgaat acaaaaaaat agctgcacag aaaactatag aaaaaaagga ggctaagctg
901 aaagaaatta agacgatact tgaagaagag attactccaa ccattcaaaa attaaaagag
961 gaaagatcgt cctacttgga gtaccaaaaa gtaatgagag aaatagaaca tttgagtcgt
1021 ttatatattg cttatcagtt tttgctggct gaagatacca aagtacgctc agctgaggaa
1081 ttaaaagaaa tgcaagataa agttataaag cttcaggaag aattgtctga gaatgataaa
1141 aaaataaaag cacttaatca tgaaatagaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//