LOCUS BC107880 2436 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens zinc finger, MYM-type 6, mRNA (cDNA clone
IMAGE:6497830), partial cds.
ACCESSION BC107880
VERSION BC107880.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2436)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2436)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: j Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68509915.
FEATURES Location/Qualifiers
source 1..2436
/db_xref="H-InvDB:HIT000338968"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6497830"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>2436
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/db_xref="GeneID:9204"
/db_xref="HGNC:HGNC:13050"
/db_xref="IMGT/GENE-DB:13050"
/db_xref="MIM:13050"
CDS 210..>2436
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/codon_start=1
/product="ZMYM6 protein"
/protein_id="AAI07881.1"
/db_xref="GeneID:9204"
/db_xref="HGNC:HGNC:13050"
/db_xref="IMGT/GENE-DB:13050"
/db_xref="MIM:13050"
/translation="MKEPLDGECGKAVVPQQELLDKIKEEPDNAQEYGCVQQPKTQEG
KLKIGGVSSVNERPIAQQLNPGFQLSFASSGPSVLLPSVPAVAIKVFCSGCKKMLYKG
QTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTNCSKDILNPKDVITTRFENSY
PSKDFCSQSCLSSYELKKKPVVTIYTKSISTKCSMCQKNADTRFEVKYQNVVHGLCSD
ACFSKFHSTNNLTMNCCENCGSYCYSSSGPCQSQKVFSSTSVTAYKQNSAQIPPYALG
KSLRPSAEMIETTNDSGKTELFCSINCLSAYRVKTVTSSGVQVSCHSCKTSAIPQYHL
AMSNGTIYSFCSSSCVVAFQNVFSKPKGTNSSAVPLSQGQVVVSPPSSRSAVSIGGGN
TSAVSPSSIRGSAAASLQPLAEQSQQVALTHTVVKLKCQHCNHLFATKPELLFYKGKM
FLFCGKNCSDEYKKKNKVVAMCDYCKLQKIIKETVRFSGVDKPFCSEVCKFLSARDFG
ERWGNYCKMCSYCSQTSPNLVENRLEGKLEEFCCEDCMSKFTVLFYQMAKCDGCKRQG
KLSESIKWRGNIKHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTAVTELPSARTDT
TPVITSVMSLAKIPATLSTGNTNSVLKGAVTKEAAKIIQDESTQEDAMKFPSSQSSQP
SRLLKNKGISCKPVTQTKATSCKPHTQHKECQTDLPMPNEKNDAELDSPPSKKKKKKK
KK"
BASE COUNT 753 a 521 c 502 g 660 t
ORIGIN
1 ggggaggcgt ggttggccgg ttgttgcgtt gggatggatc aggcggaatt ccagaagaga
61 aaataatccc tgtctagatg cagaggactt ggttcctatt ccagtgctcc tccggtagca
121 gggaggcgac agaaggtgtc caactatcca ttaccaagaa gaaatctatt cgtttgagcc
181 tgagacactc tttgaggtaa aaaattagaa tgaaagaacc tttggatggt gaatgtggca
241 aagcagtggt accacagcag gagcttctgg acaaaattaa agaagaacca gacaatgctc
301 aagagtatgg atgtgtccaa cagccaaaaa ctcaagaagg taaattgaaa attggtggtg
361 tgtcttcagt taatgagaga cctattgccc agcagttgaa cccaggcttt cagctttctt
421 ttgcatcatc tggcccaagt gtgttgcttc cttcagttcc agctgttgct attaaggttt
481 tttgttctgg ttgtaaaaaa atgctttata agggccaaac tgcatatcat aagacaggat
541 ctactcagct cttctgctcc acacgatgca tcaccagaca ttcttcacct gcctgcctgc
601 cacctcctcc caagaaaacc tgcacaaact gctcgaaaga cattttaaat cctaaggatg
661 tgatcacaac tcgctttgag aattcctatc ctagcaaaga tttctgcagc caatcatgct
721 tgtcatctta tgagctaaag aaaaaacctg ttgttaccat atataccaaa agcatttcaa
781 ctaagtgcag tatgtgtcag aagaatgctg atactcgatt tgaagttaaa tatcaaaatg
841 tggtacatgg tctttgtagt gatgcctgtt tttcaaaatt tcactctaca aacaacctca
901 ccatgaactg ttgtgagaac tgtgggagct attgctatag tagctctggt ccttgccaat
961 cccagaaggt ttttagttca acaagtgtca cggcatacaa gcagaattct gcccaaattc
1021 ctccatatgc cctggggaag tcattgaggc cctcagctga aatgattgag actacaaatg
1081 attcaggaaa aacagagctt ttctgctcta ttaattgctt atctgcttac agagttaaga
1141 ctgttacttc ttcaggtgtc caggtttcat gtcatagttg taaaacctca gcaatccctc
1201 agtatcacct agccatgtca aatggaacta tatacagctt ctgcagctcc agttgtgtgg
1261 ttgctttcca gaatgtattt agcaagccaa aaggaacaaa ctcttcggcg gtgcccctgt
1321 ctcagggcca agtggttgta agcccgccct cctccaggtc agcagtgtca ataggaggag
1381 gtaacacctc tgccgtttcc cccagctcca tccgtggctc tgctgcagcc agcctccaac
1441 ctcttgctga acaatcccag caagttgctt taacccatac agttgttaaa ctcaagtgtc
1501 agcactgtaa ccatctattt gccacaaaac cagaacttct tttttacaag ggtaaaatgt
1561 ttctgttttg tggcaagaat tgctctgatg aatacaagaa gaaaaataaa gttgtggcaa
1621 tgtgtgacta ctgtaaactg cagaaaatta taaaggagac tgtgcgattc tcaggggttg
1681 ataagccatt ctgtagtgaa gtttgcaaat tcctctctgc ccgtgacttt ggagaacgat
1741 ggggaaacta ctgtaagatg tgcagctact gttcacagac atccccaaat ttggtagaaa
1801 atcgattgga gggcaagtta gaagagtttt gttgtgaaga ttgtatgtcc aaatttacag
1861 ttctgtttta tcagatggcc aagtgtgatg gttgtaaacg acagggtaaa ctaagcgagt
1921 ccataaagtg gcgaggcaac attaaacatt tctgtaacct attttgtgtc ttggagtttt
1981 gtcatcagca aattatgaat gactgtcttc cacaaaataa agtaaatatt tctaaagcaa
2041 aaactgctgt gacggagctc ccttctgcaa ggacagatac aacaccagtt ataaccagtg
2101 tgatgtcatt ggcaaaaata cctgctacct tatctacagg gaacactaac agtgttttaa
2161 aaggtgcagt tactaaagag gcagcaaaga tcattcaaga tgaaagtaca caggaagatg
2221 ctatgaaatt tccatcttcc caatcttccc agccttccag gcttttaaag aacaaaggca
2281 tatcatgcaa acccgtcaca cagaccaagg ccacttcttg caaaccacat acacagcaca
2341 aagaatgtca gacagattta cctatgccta atgaaaaaaa tgatgcagaa cttgattctc
2401 caccttcaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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