LOCUS BC107772 1065 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
IMAGE:6451988), complete cds.
ACCESSION BC107772
VERSION BC107772.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1065)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538460
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1065
/db_xref="H-InvDB:HIT000338902"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6451988"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1065
/gene="NCOR1"
/gene_synonym="hCIT529I10"
/gene_synonym="hN-CoR"
/gene_synonym="KIAA1047"
/gene_synonym="N-CoR"
/gene_synonym="TRAC1"
/db_xref="GeneID:9611"
/db_xref="HGNC:HGNC:7672"
/db_xref="MIM:600849"
CDS 258..893
/gene="NCOR1"
/gene_synonym="hCIT529I10"
/gene_synonym="hN-CoR"
/gene_synonym="KIAA1047"
/gene_synonym="N-CoR"
/gene_synonym="TRAC1"
/codon_start=1
/product="NCOR1 protein"
/protein_id="AAI07773.1"
/db_xref="GeneID:9611"
/db_xref="HGNC:HGNC:7672"
/db_xref="MIM:600849"
/translation="MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYR
SSHLEVSQASQLLQQQQQQQLRRRPSLLSEFHPGSDRPQERRTSYEPFHPGPSPVDHD
SLESKRPRLEQVSDSHFQRVSAAVLPLVHPLPEGLRASADAKKDPAFGGKHEAPSSPI
SGQPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQVNVFA"
BASE COUNT 332 a 249 c 243 g 241 t
ORIGIN
1 gggggagagg ggttgagtca agatggcggc caaggtggcg aagcagcagc cgcggcggcg
61 gcggcggctg gagtgagcgt ccgactcgcc gcgccgaacg aggtcccggt gtagggccgc
121 gcgccgtggc cgcgtcccac tcctcaggcc ggggcgcacg tcggctccca cgcttagcca
181 gctcccggtg gtttcctaga aacatgattg tttattggca ttgatctcac agtctggtga
241 ggacttcttt actgataatg tcaagttcag gttatcctcc caaccaagga gcattcagca
301 cagaacaaag tcgttatcct cctcactctg tccagtatac atttcccaac acccgccacc
361 agcaggagtt cgcagtccct gattatcgtt cctctcatct tgaagtgagt caggcatcac
421 agcttttgca gcaacagcag cagcaacagc ttcgaaggcg accttccttg ctttcagaat
481 ttcacccagg ttctgacagg cctcaagaaa ggagaactag ttatgaaccg tttcatccag
541 gcccatcccc agtggatcat gattcactgg aatcgaagcg accacgtctg gaacaggttt
601 ctgattctca ttttcagcgt gtcagtgctg cggttttgcc tttagtgcac ccgctgccag
661 aagggctgag ggcttctgca gatgctaaga aggatccagc attcggaggc aaacatgaag
721 ctccatcctc tccaatttcg gggcaaccat gtggagatga tcaaaatgct tcaccttcaa
781 aactctcaaa ggaagagtta atacagagta tggatcgtgt agatcgagaa attgcaaaag
841 tagaacagca gatccttaaa ctgaaaaaga aacaagtaaa tgtctttgct taatatattc
901 taagaatgta tgtttgtctc cctacagtag atatttttga gttttccata ttttgaaact
961 ttacataaaa ggaatcatgc cttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//