LOCUS BC107719 1105 bp mRNA linear HUM 04-AUG-2006
DEFINITION Homo sapiens mitochondrial ribosomal protein L39, mRNA (cDNA clone
MGC:104174 IMAGE:6737868), complete cds.
ACCESSION BC107719
VERSION BC107719.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1105)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1105)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: o Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27886581.
FEATURES Location/Qualifiers
source 1..1105
/db_xref="H-InvDB:HIT000338849"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104174 IMAGE:6737868"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1105
/gene="MRPL39"
/gene_synonym="C21orf92"
/gene_synonym="FLJ20451"
/gene_synonym="L39mt"
/gene_synonym="MGC3400"
/gene_synonym="MRP-L5"
/gene_synonym="MSTP003"
/gene_synonym="PRED22"
/gene_synonym="PRED66"
/gene_synonym="RPML5"
/db_xref="GeneID:54148"
/db_xref="HGNC:HGNC:14027"
CDS 11..1027
/gene="MRPL39"
/gene_synonym="C21orf92"
/gene_synonym="FLJ20451"
/gene_synonym="L39mt"
/gene_synonym="MGC3400"
/gene_synonym="MRP-L5"
/gene_synonym="MSTP003"
/gene_synonym="PRED22"
/gene_synonym="PRED66"
/gene_synonym="RPML5"
/codon_start=1
/product="mitochondrial ribosomal protein L39"
/protein_id="AAI07720.1"
/db_xref="GeneID:54148"
/db_xref="HGNC:HGNC:14027"
/translation="MEALAMGSRALRLWLVAPGGGIKWRFIATSPASQLSPTELTEMR
NDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRK
SILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAFKD
EYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFET
LEVEAKVALEIFQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDVSEGPLIPRTSICF
QYEVSAVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIWDKLLERSRKMVTEDQSKATEE
CTST"
BASE COUNT 365 a 197 c 248 g 295 t
ORIGIN
1 gggggctgct atggaggcgc tggccatggg ttcccgggcg ctgcggctct ggctggtcgc
61 acccggtggc gggatcaaat ggagatttat agcaacatcg ccagcttctc agctgtcacc
121 gacagaattg acagaaatgc ggaatgatct ctttaataaa gagaaagcca ggcagttatc
181 attaactccc cgaactgaga agatagaagt taagcatgtt gggaaaactg accccggtac
241 tgtcttcgtg atgaataaaa acatttcaac tccctacagt tgtgccatgc atttaagcga
301 gtggtattgc aggaagtcca ttctggctct ggtggatgga cagccttggg acatgtataa
361 gcctttaaca aagtcctgtg aaattaaatt tcttactttc aaagattgtg atccaggaga
421 agtgaataag gcatattggc gttcctgtgc tatgatgatg ggctgtgtga tagagagggc
481 attcaaagat gaatatatgg tcaatttggt cagagctcca gaagttcctg taatttctgg
541 tgccttctgt tatgacgtag ttttggatag caaacttgat gagtggatgc caacaaaaga
601 gaacttacgt tccttcacaa aggatgctca tgctttaatt tataaagatc ttccatttga
661 aactctggaa gttgaagcaa aagtggcatt ggaaatattt caacacagca agtacaaagt
721 agatttcata gaagagaagg catctcagaa ccctgagaga atagtcaagc tacacagaat
781 aggtgacttc attgatgtga gtgagggccc tcttattcca agaacaagta tttgtttcca
841 gtatgaagtg tcagcagttc acaatcttca acccacccag ccaagtctca tacgaagatt
901 ccagggtgtg tctttacctg ttcacttaag agcacatttt acaatatggg ataagctatt
961 ggaaagatct cggaaaatgg taactgaaga tcaaagtaaa gcaacagagg aatgtacatc
1021 tacctaataa ctttctaaaa tttaaatatg tataataaaa taaatgtttt aaatataaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaa
//