LOCUS BC107492 1858 bp mRNA linear HUM 23-DEC-2005
DEFINITION Homo sapiens tweety homolog 2 (Drosophila), transcript variant 1,
mRNA (cDNA clone MGC:126172 IMAGE:40033786), complete cds.
ACCESSION BC107492
VERSION BC107492.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 12 Row: n Column: 6.
FEATURES Location/Qualifiers
source 1..1858
/db_xref="H-InvDB:HIT000338773"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126172 IMAGE:40033786"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTTGTGTC"
gene 1..1858
/gene="TTYH2"
/gene_synonym="C17orf29"
/gene_synonym="MGC4837"
/db_xref="GeneID:94015"
/db_xref="HGNC:HGNC:13877"
/db_xref="IMGT/GENE-DB:13877"
/db_xref="MIM:608855"
CDS 28..1632
/gene="TTYH2"
/gene_synonym="C17orf29"
/gene_synonym="MGC4837"
/codon_start=1
/product="tweety 2, isoform 1"
/protein_id="AAI07493.1"
/db_xref="GeneID:94015"
/db_xref="HGNC:HGNC:13877"
/db_xref="IMGT/GENE-DB:13877"
/db_xref="MIM:608855"
/translation="MQAARVDYIAPWWVVWLHSVPHVGLRLQPVNSTFSPGDESYQES
LLFLGLVAAVCLGLNLIFLVAYLVCACHCRRDDAVQTKQHHSCCITWTAVVAGLICCA
AVGVGFYGNSETNDGAYQLMYSLDDANHTFSGIDALVSGTTQKMKVDLEQHLARLSEI
FAARGDYLQTLKFIQQMAGSVVVQLSGLPVWREVTMELTKLSDQTGYVEYYRWLSYLL
LFILDLVICLIACLGLAKRSKCLLASMLCCGALSLLLSWASLAADGSAAVATSDFCVA
PDTFILNVTEGQISTEVTRYYLYCSQSGSSPFQQTLTTFQRALTTMQIQVAGLLQFAV
PLFSTAEEDLLAIQLLLNSSESSLHQLTAMVDCRGLHKDYLDALAGICYDGLQGLLYL
GLFSFLAALAFSTMICAGPRAWKHFTTRNREYDDIDDDDPFNPQAWRMAAHSPPRGQL
HSFCSYSSGLGSQTSLQPPAQTISNAPVSEYMNQAMLFGRNPRYENVPLIGRASPPPT
YSPSMRATYLSVADEHLRHYGNQFPA"
BASE COUNT 342 a 604 c 518 g 394 t
ORIGIN
1 gcttgtgggt agcactcggg ccgagccatg caggcggcgc gcgtggacta catcgctccc
61 tggtgggtcg tgtggctgca cagcgtcccg cacgtcggcc tgcgcctgca gcccgtgaac
121 agcaccttca gccccggcga cgagagttac caggagtcgc tgctgttcct ggggctggtg
181 gccgccgtct gcctgggcct gaacctcatc ttccttgtgg cttacctggt ctgtgcatgc
241 cactgccggc gggacgatgc ggtgcagacc aagcagcacc actcctgctg catcacctgg
301 acggccgtgg tggccgggct catctgctgt gctgcggtgg gcgttggttt ctatggaaac
361 agcgagacca acgatggggc gtaccagctg atgtactcct tggacgatgc caaccacacc
421 ttctctggga tcgatgctct ggtttccgga actacccaga agatgaaggt ggacctagag
481 cagcacctgg cccggctcag tgagatcttt gctgcccggg gcgattacct gcagaccctg
541 aagttcatac agcagatggc gggcagcgtt gttgttcagc tctcaggact gcccgtgtgg
601 agggaggtca ccatggagct gaccaagcta tccgaccaga ctggctacgt ggagtactac
661 aggtggctct cctacctcct gctctttatc ctggacctgg tcatctgcct cattgcctgc
721 ctgggactgg ccaagcgctc caagtgtctc ctggcctcga tgctgtgctg tggggcactg
781 agcctgctcc tcagttgggc atccctggcc gctgatggct ctgcggcagt ggccaccagt
841 gacttctgtg tggctcctga caccttcatc ctgaacgtca cggagggcca gatcagcaca
901 gaggtgactc gctactacct gtattgcagc cagagtggaa gcagcccctt ccagcagacc
961 ctgaccacct tccagcgcgc actcaccacc atgcagatcc aggtcgcggg gctgctgcag
1021 tttgccgtgc ccctcttctc cactgcagag gaagacctgc ttgcaatcca gctcctgctg
1081 aactcctcag agtccagcct tcaccagctg actgccatgg tggactgccg agggctgcac
1141 aaggattatc tggacgctct tgctggcatc tgctacgacg gcctccaggg cttgctgtac
1201 cttggcctct tctccttcct ggccgccctc gccttctcca ccatgatctg tgcggggcca
1261 agggcctgga agcacttcac caccagaaac agagaatacg atgacattga tgatgatgac
1321 ccctttaacc cccaagcctg gcgcatggcg gctcacagtc ccccgagggg acagcttcac
1381 agcttctgca gctacagcag tggcctggga agtcagacca gcctgcagcc cccggcccag
1441 accatctcca acgcccctgt ctccgagtac atgaaccaag ccatgctctt tggtaggaac
1501 ccacgctacg agaacgtgcc actaatcggg agagcctccc ctccgcctac gtactctccc
1561 agcatgagag ccacctacct gtctgtggcg gatgagcacc tgaggcacta cgggaatcag
1621 tttccagcct aacagacttt cgggggttcc tgcctccttt ttccgttctg gtttttaatt
1681 agtgcaaata caagctgcgt ttctttaata gaaaccaaag gcatctggag cccgagaggc
1741 ctcctgctgt ggcagaggag cagctgggat tcccgaccaa agccccaggg ggtgcagaag
1801 actcaccacg cgggccagcc tctctctttt gccctgctct ccacaccaga aatgcccc
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