LOCUS BC107171 1085 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens deiodinase, iodothyronine, type I, mRNA (cDNA clone
MGC:130051 IMAGE:40036826), complete cds.
ACCESSION BC107171
VERSION BC107171.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1085)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1085)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 4, 2006 this sequence version replaced BC107171.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: p Column: 20.
FEATURES Location/Qualifiers
source 1..1085
/db_xref="H-InvDB:HIT000338735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:130051 IMAGE:40036826"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: ACCC sequenced from the reverse primer"
gene 1..1085
/gene="DIO1"
/gene_synonym="5DI"
/db_xref="GeneID:1733"
/db_xref="HGNC:HGNC:2883"
/db_xref="MIM:147892"
CDS 24..773
/gene="DIO1"
/gene_synonym="5DI"
/codon_start=1
/transl_except=(pos:399..401,aa:Sec)
/product="deiodinase, iodothyronine, type I"
/protein_id="AAI07172.1"
/db_xref="GeneID:1733"
/db_xref="HGNC:HGNC:2883"
/db_xref="MIM:147892"
/translation="MGLPQPGLWLKRLWVLLEVAVHVVVGKVLLILFPDRVKRNILAM
GEKTGMTRNPHFSHDNWIPTFFSTQYFWFVLKVRWQRLEDTTELGGLAPNCPVVRLSG
QRCNIWEFMQGNRPLVLNFGSCTUPSFMFKFDQFKRLIEDFSSIADFLVIYIEEAHAS
DGWAFKNNMDIRNHQNLQDRLQAAHLLLARSPQCPVVVDTMQNQSSQLYAALPERLYI
IQEGRILYKGKSGPWNYNPEEVRAVLEKLHS"
BASE COUNT 273 a 276 c 277 g 259 t
ORIGIN
1 gagcttactc tggctttgcc gagatggggc tgccccagcc agggctgtgg ctgaagaggc
61 tctgggtgct cttggaggtg gctgtgcatg tggtcgtggg taaagtgctt ctgatattgt
121 ttccagacag agtcaagcgg aacatcctgg ccatgggcga gaagacgggt atgaccagga
181 acccccattt cagccacgac aactggatac caaccttttt cagcacccag tatttctggt
241 tcgtcttgaa ggtccgttgg cagcgactag aggacacgac tgagctaggg ggtctggccc
301 caaactgccc ggtggtccgc ctctcaggac agaggtgcaa catttgggag tttatgcaag
361 gtaataggcc actggtgctg aattttggaa gttgtacctg accttcattt atgttcaaat
421 ttgaccagtt caagaggctt attgaagact ttagttccat agcagatttt cttgtcattt
481 acattgaaga agcacatgca tcagatggct gggcttttaa gaacaacatg gacatcagaa
541 atcaccagaa ccttcaggat cgcctgcagg cagcccatct actgctggcc aggagccccc
601 agtgccctgt ggtggtggac accatgcaga accagagcag ccagctctac gcagcactgc
661 ctgagaggct ctacataatc caggagggca ggatcctcta caagggtaaa tctggccctt
721 ggaactacaa cccagaggaa gttcgtgctg ttctggaaaa gctccacagt taatctggac
781 agatacctca attctaggtg accaacggga gggcttctca aggcttagct ctccctgaga
841 cccagctggc ttttaccctt gacctgtgtc cctagctgaa tcactagctc agatttttct
901 gatctaagca aacaactccc agctgaggaa tgcaggccac agcacccaat caagacaaat
961 tgttattatc agaaaatgaa gcaacacttg agctgttcag gccagttccc tgttgaagaa
1021 acagttccct gttgaagaaa gtagagcctg acactgctcc cactttggag accacattcc
1081 ctgca
//