LOCUS BC107166 2432 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens lactoperoxidase, mRNA (cDNA clone MGC:129990
IMAGE:40034365), complete cds.
ACCESSION BC107166
VERSION BC107166.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2432)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2432)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: I Column: 11.
FEATURES Location/Qualifiers
source 1..2432
/db_xref="H-InvDB:HIT000338730"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129990 IMAGE:40034365"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GACTTTAC sequenced from
the forward primer"
gene 1..2432
/gene="LPO"
/gene_synonym="SPO"
/db_xref="GeneID:4025"
/db_xref="HGNC:HGNC:6678"
/db_xref="MIM:150205"
CDS 188..2326
/gene="LPO"
/gene_synonym="SPO"
/codon_start=1
/product="lactoperoxidase"
/protein_id="AAI07167.1"
/db_xref="GeneID:4025"
/db_xref="HGNC:HGNC:6678"
/db_xref="MIM:150205"
/translation="MRVLLHLPALLASLILLQAAASTTRAQTTRTSAISDTVSQAKVQ
VNKAFLDSRTRLKTAMSSETPTSRQLSEYLKHAKGRTRTAIRNGQVWEESLKRLRQKA
SLTNVTDPSLDLTSLSLEVGCGAPAPVVRCDPCSPYRTITGDCNNRRKPALGAANRAL
ARWLPAEYEDGLSLPFGWTPGKTRNGFPLPLAREVSNKIVGYLNEEGVLDQNRSLLFM
QWGQIVDHDLDFAPDTELGSSEYSKAQCDEYCIQGDNCFPIMFPPNDPKAGTQGKCMP
FFRAGFVCPTPPYKSLAREQINALTSFLDASFVYSSEPSLASRLRNLSSPLGLMAVNQ
EVSDHGLPYLPYDSKKPSPCEFINTTARVPCFLAGDSRASEHILLATSHTLFLREHNR
LARELKRLNPQWDGEKLYQEARKILGAFVQIITFRDYLPILLGDHMQKWIPPYQGYSE
SVDPRISNVFTFAFRFGHLEVPSSMFRLDENYQPWGPEPELPLHTLFFNTWRMVKDGG
IDPLVRGLLAKKSKLMKQNKMMTGELRNKLFQPTHRIHGFDLAAINTQRCRDHGQPGY
NSWRAFCDLSQPQTLEELNTVLKSKMLAKKLLGLYGTPDNIDIWIGAIAEPLVERGRV
GPLLACLLGKQFQQIRDGDRFWWENPGVFTNEQKDSLQKMSFSRLVCDNTRITKVPRD
PFWANSYPYDFVDCSAIDKLDLSPWASVKN"
BASE COUNT 551 a 751 c 626 g 504 t
ORIGIN
1 cctggtgtat ctgcccggag tcacacagtc tttcctgcta agcctcagcg tctcctccaa
61 gccacatcaa aatctttcct tctgggcctt tcccagaagt gaattcttgc tggaaggtat
121 aaaagaccag ctcctccaag cagagcaact ccctggctgc cgtgaaaaga caaggcactg
181 ggcagtgatg agggtccttc tccatctccc agccctcctg gcttccctca tcttgcttca
241 ggctgcagca tctaccacaa gagcgcagac taccagaacc tctgccatct ccgatactgt
301 gagtcaggcc aaggtccaag tcaacaaggc cttcctggac tcccgaacca ggctgaagac
361 cgccatgagc tctgagactc ccaccagccg acagctctca gaatacctca agcatgccaa
421 aggccggacg cgcacagcca tccgcaatgg acaggtgtgg gaggagtctt taaagagact
481 gaggcagaag gcatccttga ccaatgtcac agatcccagc ctggacttga cttcactgtc
541 tctggaggtg ggctgtggtg ctcctgctcc cgtggtgaga tgcgacccgt gcagccctta
601 ccgcaccatt acgggagact gcaataacag gaggaagcct gcgctgggcg ccgccaacag
661 ggctctggcg cgctggctgc ccgcggagta cgaggacggg ctctccctgc ccttcggctg
721 gacgccgggg aagacgcgca acggcttccc tctcccgctg gcccgggagg tatctaacaa
781 gattgttggc tatctgaatg aggagggtgt tctggaccaa aacaggtccc tgctcttcat
841 gcagtggggt cagattgtgg atcatgacct ggactttgcc cctgacaccg agctggggag
901 tagcgagtac tccaaagccc agtgtgatga gtactgtatc cagggagaca actgcttccc
961 catcatgttc ccacccaatg accccaaggc ggggactcaa gggaaatgca tgcctttctt
1021 ccgagctggg ttcgtctgcc ccactccacc ctacaagtcc ctggcccgag agcagatcaa
1081 cgctctgacc tccttcctgg atgccagctt tgtgtacagc tccgagccaa gcctggccag
1141 ccgcctccgc aacctcagca gccccctggg cctcatggct gtcaaccagg aggtctcaga
1201 ccatggacta ccctacctgc cctatgacag caagaagcca agcccctgtg agttcatcaa
1261 caccactgcc cgtgtgccct gcttcctggc aggagattct cgagcctcag agcatattct
1321 gctggccaca tcccacaccc tctttctccg cgagcataac cggctggcca gagaactaaa
1381 gagactcaac cctcagtggg atggagagaa gctctaccag gaagcccgga aaatcctggg
1441 agccttcgtg cagattatca cctttaggga ctacctaccc attttgctag gtgaccacat
1501 gcagaagtgg atacccccat atcaaggcta cagtgaatct gtggatccca gaatttccaa
1561 tgtcttcacc ttcgccttcc gctttggcca cttggaggtc ccctctagta tgttccgcct
1621 ggatgagaat tatcagccat gggggccaga accagaactc cccctccaca ccctcttctt
1681 caacacttgg aggatggtca aagatggtgg aattgatcct ctggtgcggg gcctgctggc
1741 caagaaatcc aagctgatga aacagaataa aatgatgact ggagagctgc gcaacaagct
1801 tttccagcca actcacagga tccatggctt tgacctggct gccatcaaca cacagcgttg
1861 ccgggaccat gggcaacctg ggtacaattc ctggagagcc ttctgtgacc tctcacagcc
1921 gcagacacta gaggagttga acacagtgct gaagagcaag atgctggcca agaagttact
1981 gggtctctac gggacccctg acaacatcga catctggata ggggccattg ctgagccgct
2041 ggtggaaagg ggtcgggtgg ggcctctcct ggcctgcctc ttgggcaagc agttccagca
2101 gatccgtgat ggagacaggt tctggtggga aaaccctggg gtcttcacga acgagcagaa
2161 ggactctcta cagaaaatgt ccttctcacg ccttgtctgt gacaacaccc gcatcaccaa
2221 ggtcccacgg gacccattct gggccaacag ctacccctat gacttcgtgg attgctcagc
2281 catcgacaag ctggacctgt caccctgggc ctcagtgaag aattaggggc ccgcgctgca
2341 caggaaagtt ccctttggtc cacagggcca tttcaagcaa gttcaatgac ctggtccctt
2401 agagctccat atcccagtcc cagcccttct tt
//