LOCUS BC107159 1420 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens chemokine (C-C motif) receptor 8, mRNA (cDNA clone
MGC:129973 IMAGE:40032938), complete cds.
ACCESSION BC107159
VERSION BC107159.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1420)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: d Column: 22.
FEATURES Location/Qualifiers
source 1..1420
/db_xref="H-InvDB:HIT000338723"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129973 IMAGE:40032938"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AAACTC sequenced from
the forward primer"
gene 1..1420
/gene="CCR8"
/gene_synonym="CDw198"
/gene_synonym="CKR-L1"
/gene_synonym="CKRL1"
/gene_synonym="CY6"
/gene_synonym="GPR-CY6"
/gene_synonym="TER1"
/db_xref="GeneID:1237"
/db_xref="HGNC:HGNC:1609"
/db_xref="MIM:601834"
CDS 72..1139
/gene="CCR8"
/gene_synonym="CDw198"
/gene_synonym="CKR-L1"
/gene_synonym="CKRL1"
/gene_synonym="CY6"
/gene_synonym="GPR-CY6"
/gene_synonym="TER1"
/codon_start=1
/product="CCR8 protein"
/protein_id="AAI07160.1"
/db_xref="GeneID:1237"
/db_xref="HGNC:HGNC:1609"
/db_xref="MIM:601834"
/translation="MDYTLDLSVTTVTDYYYPDIFSSPCDAELIQTNGKLLLAVFYCL
LFVFSLLGNSLVILVLVVCKKLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFG
TVMCKVVSGFYYIGFYSSMFFITLMSVDRYLAVVHAVYALKVRTIRMGTTLCLAVWLT
AIMATIPLLVFYQVASEDGVLQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCY
IKILHQLKRCQNHNKTKAIRLVLIVVIASLLFWVPFNVVLFLTSLHSMHILDGCSISQ
QLTYATHVTEIISFTHCCVNPVIYAFVGEKFKKHLSEIFQKSCSQIFNYLGRQMPRES
CEKSSSCQQHSSRSSSVDYIL"
BASE COUNT 356 a 324 c 321 g 419 t
ORIGIN
1 ctttgtgaag aaggaattgg caacactgaa acctccagaa caaaggctgt cactaaggtc
61 ccgctgcctt gatggattat acacttgacc tcagtgtgac aacagtgacc gactactact
121 accctgatat cttctcaagc ccctgtgatg cggaacttat tcagacaaat ggcaagttgc
181 tccttgctgt cttttattgc ctcctgtttg tattcagtct tctgggaaac agcctggtca
241 tcctggtcct tgtggtctgc aagaagctga ggagcatcac agatgtatac ctcttgaacc
301 tggccctgtc tgacctgctt tttgtcttct ccttcccctt tcagacctac tatctgctgg
361 accagtgggt gtttgggact gtaatgtgca aagtggtgtc tggcttttat tacattggct
421 tctacagcag catgtttttc atcaccctca tgagtgtgga caggtacctg gctgttgtcc
481 atgccgtgta tgccctaaag gtgaggacga tcaggatggg cacaacgctg tgcctggcag
541 tatggctaac cgccattatg gctaccatcc cattgctagt gttttaccaa gtggcctctg
601 aagatggtgt tctacagtgt tattcatttt acaatcaaca gactttgaag tggaagatct
661 tcaccaactt caaaatgaac attttaggct tgttgatccc attcaccatc tttatgttct
721 gctacattaa aatcctgcac cagctgaaga ggtgtcaaaa ccacaacaag accaaggcca
781 tcaggttggt gctcattgtg gtcattgcat ctttactttt ctgggtccca ttcaacgtgg
841 ttcttttcct cacttccttg cacagtatgc acatcttgga tggatgtagc ataagccaac
901 agctgactta tgccacccat gtcacagaaa tcatttcctt tactcactgc tgtgtgaacc
961 ctgttatcta tgcttttgtt ggggagaagt tcaagaaaca cctctcagaa atatttcaga
1021 aaagttgcag ccaaatcttc aactacctag gaagacaaat gcctagggag agctgtgaaa
1081 agtcatcatc ctgccagcag cactcctccc gttcctccag cgtagactac attttgtgag
1141 gatcaatgaa gactaaatat aaaaaacatt ttcttgaatg gcatgctagt agcagtgagc
1201 aaaggtgtgg gtgtgaaagg tttccaaaaa aagttcagca tgaaggatgc cgtgtgtgtt
1261 gttgccaaca cttggaacac gatgactggg gacgtggttg tgcatgcctg gcacaacatc
1321 aagcctgtga ttgtgtttat tgatgatgtt gaacaagtgg tggctttgga ggattctgta
1381 tgccaagtga aaggggagat gtctgacctc cttcatatag
//