LOCUS BC107149 1565 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens paired box 4, mRNA (cDNA clone MGC:129959
IMAGE:40032097), complete cds.
ACCESSION BC107149
VERSION BC107149.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1565)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1565)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 4, 2006 this sequence version replaced BC107149.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: c Column: 13.
FEATURES Location/Qualifiers
source 1..1565
/db_xref="H-InvDB:HIT000338713"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129959 IMAGE:40032097"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: ATCT sequenced from the
forward primer"
gene 1..1565
/gene="PAX4"
/db_xref="GeneID:5078"
/db_xref="HGNC:HGNC:8618"
/db_xref="MIM:167413"
CDS 462..1235
/gene="PAX4"
/codon_start=1
/product="PAX4 protein"
/protein_id="AAI07150.1"
/db_xref="GeneID:5078"
/db_xref="HGNC:HGNC:8618"
/db_xref="MIM:167413"
/translation="MAWSSKSWLCLIASSCPRDTLLPSAHHASPVPASHLTQVSNGCV
SKILGRYYRTGVLEPKGIGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGL
CTQDKTPSVSSINRVLRALQEDQGLPCTRLRSPAVLAPAVLTPHSGSETPRGTHPGTG
HRNRTIFSPSQAEALEKEFQRGQYPDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQ
EKLKWEMQLPGASQGLTVPRVAPGIISAQGPTVFMSRKY"
BASE COUNT 307 a 451 c 465 g 342 t
ORIGIN
1 gggcagcaag gatgcagtct cccaggagag gatgcactcg gtggtgggaa gccaggctgg
61 aggggcctga gtgaccctct ccacaggcgg gcagggcagt gggagaggtg gtgtgtggat
121 acctctgtct cacgcccagg gatcagcagc atgaaccagc ttggggggct ctttgtgaat
181 ggccggcccc tgcctctgga tacccggcag cagattgtgc ggctagcagt cagtggaatg
241 cggccctgtg acatctcacg gatccttaag gtaatgggcc agcaccttta cccagtgatg
301 gggacaggaa gcagggagaa agggctcctc tgaaggcaag agcctggggc tgttgcaggc
361 tctgagggct tctgggactt gggtcacttc ctgggagatc ctctcggagg ttgaaaaggg
421 gagcctcagg ccctcaaagg tgaggctgga ctcccgactt catggcctgg tccagtaagt
481 cttggctttg tcttatagcc tcctcctgtc ccagggacac tctccttcct tctgcccatc
541 atgcctcacc tgtccctgct tctcacctga ctcaggtatc taatggctgt gtgagcaaga
601 tcctagggcg ttactaccgc acaggtgtct tggagccaaa gggcattggg ggaagcaagc
661 cacggctggc tacaccccct gtggtggctc gaattgccca gctgaagggt gagtgtccag
721 ccctctttgc ctgggaaatc caacgccagc tttgtgctga agggctttgc acccaggaca
781 agactcccag tgtctcctcc atcaaccgag tcctgcgggc attacaggag gaccagggac
841 taccgtgcac acggctcagg tcaccagctg ttttggctcc agctgtcctc actccccata
901 gtggctctga gactccccgg ggtacccacc cagggaccgg ccaccggaat cggactatct
961 tctccccaag ccaagcagag gcactggaga aagagttcca gcgtgggcag tatcctgatt
1021 cagtggcccg tggaaagctg gctactgcca cctctctgcc tgaggacacg gtgagggtct
1081 ggttttccaa cagaagagcc aaatggcgtc ggcaagagaa gctcaagtgg gaaatgcagc
1141 tgccaggtgc ttcccagggg ctgactgtac caagggttgc cccaggaatc atctctgcac
1201 agggccccac agtgttcatg tcaagaaagt actaacccaa agtctactat gtgaatggtg
1261 ccctctggag ttgtgcagga tactacttgg gtggcaggca gctctggggt cccggcgttc
1321 tctacaggag gcatcactgg aagctaaggt tcttctcttg cttttttttt ttagcagtcc
1381 cctggcagtg tgcccacagc agccctgcct gccctggaac cactgggtcc ctcctgctat
1441 cagctgtgct gggcaacagc accagaaagg tgtctgagtg acaccccacc taaagcctgt
1501 ctcaagccct gctgggactg tggctccttc ctccttcctg tgattgctcc ctcctgtgtg
1561 gacgt
//