LOCUS BC107123 941 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ets variant 2, mRNA (cDNA clone IMAGE:40023781),
complete cds.
ACCESSION BC107123
VERSION BC107123.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 13 Row: e Column: 23
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..941
/db_xref="H-InvDB:HIT000338687"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40023781"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTATTT sequenced from the reverse primer"
gene 1..941
/gene="ETV2"
/gene_synonym="ER71"
/gene_synonym="ETSRP71"
/db_xref="GeneID:2116"
/db_xref="HGNC:HGNC:3491"
/db_xref="MIM:609358"
CDS 46..600
/gene="ETV2"
/gene_synonym="ER71"
/gene_synonym="ETSRP71"
/codon_start=1
/product="ETV2 protein"
/protein_id="AAI07124.1"
/db_xref="GeneID:2116"
/db_xref="HGNC:HGNC:3491"
/db_xref="MIM:609358"
/translation="MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTA
TAETCWKGTSSSLASFPQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSW
SGASQTLGPAPLGPGPIPAAGSEGAAGQNFSQPPPGLYHLLEPGAACGWHHLFEAVPE
LSSHRLLRTEPAVGPCQFGSMPQN"
BASE COUNT 191 a 309 c 292 g 149 t
ORIGIN
1 cagaggaacc cgccagagaa cattcagaag gccttcatcg catccatgga cctgtggaac
61 tgggatgagg catccccaca ggaagtgcct ccagggaaca agctggcagg gcttgaagga
121 gccaaattag gcttctgttt ccctgatctg gcactccaag gggacacgcc gacagcgaca
181 gcagagacat gctggaaagg tacaagctca tccctggcaa gcttcccaca gctggactgg
241 ggctccgcgt tactgcaccc agaagttcca tggggggcgg agcccgactc tcaggctctt
301 ccgtggtccg gggactggac agacatggcg tgcacagcct gggactcttg gagcggcgcc
361 tcgcagaccc tgggccccgc ccctctcggc ccgggcccca tccccgccgc cggctccgaa
421 ggcgccgcgg gccagaactt ctcccagcct ccgcccggac tgtaccacct cctggaaccc
481 ggggctgcat gcgggtggca ccacctcttt gaagcggtac cagagctcag ctctcaccgt
541 ttgctccgaa ccgagcccgc agtcggaccg tgccagtttg gctcgatgcc ccaaaactaa
601 ccaccgaggt cccattcagc tgtggcagtt cctcctggag ctgctccacg acggggcgcg
661 tagcagctgc atccgttgga ctggcaacag ccgcgagttc cagctgtgcg accccaaaga
721 ggtggctcgg ctgtggggcg agcgcaagag aaagccgggc atgaattacg agaagctgag
781 ccggggcctt cgctactact atcgccgcga catcgtgcgc aagagcgggg ggcgaaagta
841 cacgtaccgc ttcgggggcc gcgtgcccag cctagcctat ccggactgtg cgggaggcgg
901 acggggagca gagacacaat aaaaattccc ggtcaaacct c
//