LOCUS BC107098 918 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens uroplakin 1A, mRNA (cDNA clone MGC:129752 IMAGE:40015700), complete cds. ACCESSION BC107098 VERSION BC107098.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 918) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 918) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 8 Row: p Column: 8. FEATURES Location/Qualifiers source 1..918 /db_xref="H-InvDB:HIT000338662" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:129752 IMAGE:40015700" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: TGTCCCT sequenced from the reverse primer" gene 1..918 /gene="UPK1A" /gene_synonym="MGC14388" /gene_synonym="TSPAN21" /gene_synonym="UP1A" /gene_synonym="UPIA" /gene_synonym="UPKA" /db_xref="GeneID:11045" /db_xref="HGNC:HGNC:12577" CDS 1..777 /gene="UPK1A" /gene_synonym="MGC14388" /gene_synonym="TSPAN21" /gene_synonym="UP1A" /gene_synonym="UPIA" /gene_synonym="UPKA" /codon_start=1 /product="uroplakin 1A" /protein_id="AAI07099.1" /db_xref="GeneID:11045" /db_xref="HGNC:HGNC:12577" /translation="MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTAD QYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLI VYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECC GTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGC FEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL" BASE COUNT 158 a 299 c 247 g 214 t ORIGIN 1 atggcgtctg cggcagcagc ggaggccgag aagggatctc cagttgtggt gggcctgcta 61 gttgtgggca atatcattat tctgctgtca ggcctgtccc tgtttgctga gaccatatgg 121 gtgacagccg accagtaccg tgtataccca ctgatgggag tctcaggcaa ggatgacgtc 181 ttcgctggtg cctggattgc catcttctgc ggcttctcct tcttcatggt agccagtttt 241 ggtgtgggtg ccgcactctg ccgccgccgg tccatggtcc tcacgtacct ggtgctcatg 301 ctcatcgtct acatcttcga gtgcgcctcc tgcatcacgt cctacaccca ccgtgactac 361 atggtgtcca acccatccct gatcaccaag cagatgctga ccttctacag cgcggacacc 421 gaccagggcc aggagctgac ccgcctctgg gaccgcgtca tgattgagca agaatgctgt 481 ggcacatctg gtcccatgga ctgggtgaac ttcacgtcag ccttccgggc ggccactccg 541 gaggtggtgt tcccctggcc cccactgtgc tgtcgccgga cgggaaactt catccccctc 601 aacgaggagg gctgccgcct ggggcacatg gactacctgt tcaccaaggg ctgcttcgaa 661 cacatcggcc acgccatcga cagctacacg tggggtatct cgtggtttgg gtttgccatc 721 ctgatgtgga cgctcccggt catgctgata gccatgtatt tctacaccac gctctgaggg 781 acaggagggg aaggcaacat acacaccccg gactcctccg catcctcctc ctgcttcctc 841 cgctgggcct ggatggctgc ctcacctctc acctcccaac gtccctagcc cttacgtcct 901 tccacttcca agatcttt //