LOCUS BC107069 1460 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens c-abl oncogene 1, receptor tyrosine kinase, mRNA (cDNA
clone IMAGE:40009788), partial cds.
ACCESSION BC107069
VERSION BC107069.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: k Column: 3.
FEATURES Location/Qualifiers
source 1..1460
/db_xref="H-InvDB:HIT000338633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40009788"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TTTCCAAT sequenced from the reverse primer"
gene <1..1460
/gene="ABL1"
/gene_synonym="bcr/abl"
/gene_synonym="c-ABL"
/gene_synonym="JTK7"
/gene_synonym="p150"
/gene_synonym="v-abl"
/db_xref="GeneID:25"
/db_xref="HGNC:HGNC:76"
/db_xref="MIM:189980"
CDS <1..1191
/gene="ABL1"
/gene_synonym="bcr/abl"
/gene_synonym="c-ABL"
/gene_synonym="JTK7"
/gene_synonym="p150"
/gene_synonym="v-abl"
/codon_start=1
/product="ABL1 protein"
/protein_id="AAI07070.1"
/db_xref="GeneID:25"
/db_xref="HGNC:HGNC:76"
/db_xref="MIM:189980"
/translation="YFFPSQQSTGRQFDSSTFGGHKSEKPALPRKRAGENRSDQVTRG
TVTPPPRLVKKNEEAADEVFKDIMESSPGSSPPNLTPKPLRRQVTVAPASGLPHKEEA
GKGSALGTPAAAEPVTPTSKAGSGAPGGTSKGPAEESRVRRHKHSSESPGRDKGKLSR
LKPAPPPPPAASAGKAGGKPSQSPSQEAAGEAVLGAKTKATSLVDAVNSDAAKPSQPG
EGLKKPVLPATPKPQSAKPSGTPISPAPVPSTLPSASSALAGDQPSSTAFIPLISTRV
SLRKTRQPPERIASGAITKGVVLDSTEALCLAISRNSEQMASHSAVLEAGKNLYTFCV
SYVDSIQQMRNKFAFREAINKLENNLRELQICPATAGSGPAATQDFSKLLSSVKEISD
IVQR"
BASE COUNT 319 a 484 c 428 g 229 t
ORIGIN
1 tacttttttc cctcccagca gtccacggga agacagtttg actcgtccac atttggaggg
61 cacaaaagtg agaagccggc tctgcctcgg aagagggcag gggagaacag gtctgaccag
121 gtgacccgag gcacagtaac gcctcccccc aggctggtga aaaagaatga ggaagctgct
181 gatgaggtct tcaaagacat catggagtcc agcccgggct ccagcccgcc caacctgact
241 ccaaaacccc tccggcggca ggtcaccgtg gcccctgcct cgggcctccc ccacaaggaa
301 gaagctggaa agggcagtgc cttagggacc cctgctgcag ctgagccagt gacccccacc
361 agcaaagcag gctcaggtgc accagggggc accagcaagg gccccgccga ggagtccaga
421 gtgaggaggc acaagcactc ctctgagtcg ccagggaggg acaaggggaa attgtccagg
481 ctcaaacctg ccccgccgcc cccaccagca gcctctgcag ggaaggctgg aggaaagccc
541 tcgcagagcc cgagccagga ggcggccggg gaggcagtcc tgggcgcaaa gacaaaagcc
601 acgagtctgg ttgatgctgt gaacagtgac gctgccaagc ccagccagcc gggagagggc
661 ctcaaaaagc ccgtgctccc ggccactcca aagccacagt ccgccaagcc gtcggggacc
721 cccatcagcc cagcccccgt tccctccacg ttgccatcag catcctcggc cctggcaggg
781 gaccagccgt cttccaccgc cttcatccct ctcatatcaa cccgagtgtc tcttcggaaa
841 acccgccagc ctccagagcg gatcgccagc ggcgccatca ccaagggcgt ggtcctggac
901 agcaccgagg cgctgtgcct cgccatctct aggaactccg agcagatggc cagccacagc
961 gcagtgctgg aggccggcaa aaacctctac acgttctgcg tgagctatgt ggattccatc
1021 cagcaaatga ggaacaagtt tgccttccga gaggccatca acaaactgga gaataatctc
1081 cgggagcttc agatctgccc ggcgacagca ggcagtggtc cagcggccac tcaggacttc
1141 agcaagctcc tcagttcggt gaaggaaatc agtgacatag tgcagaggta gcagcagtca
1201 ggggtcaggt gtcaggcccg tcggagctgc ctgcagcaca tgcgggctcg cccatacccg
1261 tgacagtggc tgacaaggga ctagtgagtc agcaccttgg cccaggagct ctgcgccagg
1321 cagagctgag ggccctgtgg agtccagctc tactacctac gtttgcaccg cctgccctcc
1381 cgcaccttcc tcctccccgc tccgtctctg tcctcgaatt ttatctgtgg agttcctgct
1441 ccgtggactg ctgggaggga
//