LOCUS BC107067 1883 bp mRNA linear HUM 27-JUN-2007
DEFINITION Homo sapiens MCF.2 cell line derived transforming sequence-like,
mRNA (cDNA clone IMAGE:40007827), partial cds.
ACCESSION BC107067
VERSION BC107067.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1883)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1883)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 8 Row: I Column: 10.
FEATURES Location/Qualifiers
source 1..1883
/db_xref="H-InvDB:HIT000338631"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40007827"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: NA"
gene <1..1883
/gene="MCF2L"
/gene_synonym="ARHGEF14"
/gene_synonym="DBS"
/gene_synonym="OST"
/db_xref="GeneID:23263"
/db_xref="HGNC:HGNC:14576"
/db_xref="MIM:609499"
CDS <1..350
/gene="MCF2L"
/gene_synonym="ARHGEF14"
/gene_synonym="DBS"
/gene_synonym="OST"
/codon_start=3
/product="MCF2L protein"
/protein_id="AAI07068.1"
/db_xref="GeneID:23263"
/db_xref="HGNC:HGNC:14576"
/db_xref="MIM:609499"
/translation="LDEAEEDGGLGPKKLVPGKYTVVADHEKGGPDALRVRSGDVVEL
VQEGDEGLWYVRDPTTGKEGWVPASSLSVRLGPSGSAQCLSSSESSPGSAVLSNSSSC
SEGGQAPFSDLQG"
BASE COUNT 380 a 529 c 564 g 410 t
ORIGIN
1 ctctcgacga ggcggaggag gacggcgggt tgggccccaa gaagctggtt ccaggtaaat
61 acacggtcgt ggcggaccac gagaagggag gccccgatgc gctgcgcgtg aggagcgggg
121 acgtggtgga gctggtgcag gagggcgacg agggcctctg gtacgtcagg gacccgacca
181 ctggcaagga gggctgggtg ccggccagca gcctgtccgt ccggctcggc ccgtccggct
241 cggcccagtg cctgagcagc tcagagtcga gcccggggtc ggccgtgctg agcaactcgt
301 ccagctgcag cgagggcggc caggccccct tctccgacct gcaggggtag cgcggcctcg
361 gcgccggaga cccgcgcgct gtctggggct gcggtggcgt ggggagggcg cggcccccgg
421 acgccccgag gaaggggcac ctcaccgccc cgacccagag cgcctggccg tgcgggctgc
481 agaggacccc tccggggcag aggcaggttc cacggaaaac cccggcccgc tggggcttcc
541 ccggagactc cagagcccac agaggagggg ccgcagggaa cagccccggg cggcaggcgc
601 cgggcagcgg catctcgtcc tggctccacc gtgctgcttc tgcctccgga cggtgctttc
661 aggggacgcg cggaccgtgg tggagctgct tccggagaag tggaggatcc tctggccaac
721 ggcctgagga gagcggggca cggggtctct ttagctttta caagttttag gattttttca
781 agcagggatc aatcccgtgg ccattttttg tggtactttg gcctcaattc ttcaccagga
841 atcactgtgt ttacatgaaa tgacaatttg atactgtatt tgatagaaaa ctattttttt
901 gttaccgggg tttacataga agcacgttgt ttataccact aagtgacttt ggcggggctc
961 tcccatggaa acggatggca ctccctgaag ctccctggtc acaggtggat gaaaacgtgt
1021 ccgtgggtga catcaggtgg tgtctccacc accaaaagca gttagaagcc aaggagattc
1081 ctttatctac ctagggttca ttttcaaaag aaaatttaaa ctataattta aacaattaac
1141 gttcttttct acaaaaaaaa tgcagggact tgattttttt aaagagcttc actgaattag
1201 gatattttta ttgcttttaa agaaaataca aagatgcagt ttctgcaggg tgtggcgtgg
1261 accagtgctg ccgaccatag ctcagagagc cctgcccctg cctcactgca ctgcagcctc
1321 ctcggaggcc gcacctccac tccactcccc acgcgccccc tgcctcccac ccaggtccac
1381 ctgccacctg gtgaccacct tgagtacaga agtgaaagtg gggagagtat tttattcaag
1441 tcacagcaga actggaaaaa aactcttctg ttttaccaac ttcttgtgtt tcagaaacat
1501 attctgttca aaacttttga agccctttcg gtgtctagtc tgcagatgtt tttgtatgtg
1561 tgcacctctg accatgtgtg tacatatgtg tcttgctgga aaggacatat tcgctgtccc
1621 cgtgctgctg ggagggccgc ctcacagcct cacggttccc agccccagca cagtggaggc
1681 aggcgtggct gcattcccct cacgctaccc tcccagcggc ttgtagccgt cactggccag
1741 acctccaggg tgcggaatca aataggaagc atgcagagac tcggcagctt ttcctctgat
1801 gtgtaagtta tttggaacgc gtgctgtgtc ccgcgatgtc cctgatgtac tgtgcaggcg
1861 cggtgcctcc gcctcgtcga gag
//