LOCUS BC107057 1267 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2Q family member 1, mRNA (cDNA clone IMAGE:40005754), partial cds. ACCESSION BC107057 VERSION BC107057.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1267) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1267) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Mar 19, 2007 this sequence version replaced BC107057.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 8 Row: f Column: 2. FEATURES Location/Qualifiers source 1..1267 /db_xref="H-InvDB:HIT000338621" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40005754" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: AGCTTCCC sequenced from the forward primer" gene <1..1267 /gene="UBE2Q1" /gene_synonym="GTAP" /gene_synonym="NICE-5" /gene_synonym="PRO3094" /db_xref="GeneID:55585" /db_xref="HGNC:HGNC:15698" CDS <1..1028 /gene="UBE2Q1" /gene_synonym="GTAP" /gene_synonym="NICE-5" /gene_synonym="PRO3094" /codon_start=3 /product="UBE2Q1 protein" /protein_id="AAI07058.1" /db_xref="GeneID:55585" /db_xref="HGNC:HGNC:15698" /translation="AQAGGSRPAGPPRGSVPGDPVRIHCNITESYPAVPPIWSVESDD PNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLYNLPQHPDVEMLDQPLPAEQCTQE DVSSEDEDEEMPEDTEDLDHYEMKEEEPAEGKKSEDDGIGKENLAILEKIKKNQRQDY LNGAVSGSVQATDRLMKELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSAL HNDLQILKEKEGADFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTK QGWSSAYSIESVIMQISATLVKGKARVQFGANKSQYSLTRAQQSYKSLVQIHEKNGWY TPPKEDG" BASE COUNT 357 a 324 c 313 g 273 t ORIGIN 1 gagcgcaggc cggaggctcc cggcccgccg gccccccacg ggggtcggtg cctggggatc 61 ctgtccgcat ccactgcaac atcacggagt cataccctgc tgtgcccccc atctggtcgg 121 tggagtctga tgaccctaac ttggctgctg tcttggagag gctggtggac ataaagaaag 181 ggaatactct gctattgcag catctgaaga ggatcatctc cgacctgtgt aaactctata 241 acctccctca gcatccagat gtggagatgc tggatcaacc cttgccagca gagcagtgca 301 cacaggaaga cgtgtcttca gaagatgaag atgaggagat gcctgaggac acagaagact 361 tagatcacta tgaaatgaaa gaggaagagc cagctgaggg caagaaatct gaagatgatg 421 gcattggaaa agaaaacttg gccatcctag agaaaattaa aaagaaccag aggcaagatt 481 acttaaatgg tgcagtgtct ggctcggtgc aggccactga ccggctgatg aaggagctca 541 gggatatata ccgatcacag agtttcaaag gcggaaacta tgcagtcgaa ctcgtgaatg 601 acagtctgta tgattggaat gtcaaactcc tcaaagttga ccaggacagc gctttgcaca 661 acgatctcca gatcctcaaa gagaaagaag gagccgactt cattctactt aacttttcct 721 ttaaagataa ctttcccttt gacccaccat ttgtcagggt tgtgtctcca gtcctctctg 781 gagggtatgt tctgggcgga ggggccatct gcatggaact tctcaccaaa cagggctgga 841 gcagtgccta ctccatagag tcagtgatca tgcagatcag tgccacactg gtgaagggga 901 aagcacgagt gcagtttgga gccaacaaat ctcaatacag tctgacaaga gcacagcagt 961 cctacaagtc cttggtgcag atccacgaaa aaaacggctg gtacacaccc ccaaaagaag 1021 acggctaacc ctggagtatc acccttcctc cctccccagg caccactgga ccaattacct 1081 ttgaatgctg tatttggatc tcacgctgcc tctgtggttc cctccctcat ttttcctgga 1141 cgtgatagct ctgcctattg caggacaatg atggctattc taaacgctaa ggaaaaaaaa 1201 caaacacaga actgtttcaa gtactcaaga ctgacttaca gaccaaccaa ccaccttgct 1261 ggaaccc //