LOCUS BC106948 2473 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens ankyrin repeat domain 28, mRNA (cDNA clone
IMAGE:40034599), partial cds.
ACCESSION BC106948
VERSION BC106948.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2473)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2473)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Mar 19, 2007 this sequence version replaced BC106948.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 14 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..2473
/db_xref="H-InvDB:HIT000338586"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40034599"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTATTCTT sequenced from the reverse primer"
gene 1..>2473
/gene="ANKRD28"
/gene_synonym="PITK"
/db_xref="GeneID:23243"
/db_xref="HGNC:HGNC:29024"
CDS 119..>2473
/gene="ANKRD28"
/gene_synonym="PITK"
/codon_start=1
/product="ANKRD28 protein"
/protein_id="AAI06949.2"
/db_xref="GeneID:23243"
/db_xref="HGNC:HGNC:29024"
/translation="MSRVCIVVLEEVEDESPAFISKLPQENKSLHSPPSGNVLVRYPS
LVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNA
KDSKWLTPLHRAVASCSEEAVQVLLKHSADVNARDKNWQTPLHIAAANKAVKCAEALV
PLLSNVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGH
IEVVKLLVSHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNAYGNTPL
HVACYNGQDVVVNELIDCGAIVNQKNEKGFTPLHFAAASTHGALCLELLVGNGADVNM
KSKDGKTPLHMTALHGRFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLI
TSGADTAKRGIHGMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGN
LECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL
HYAATSDTDGKCLEYLLRNDANPGIRDKQGYNAVHYSAAYGHRLCLQLIASETPLDVL
METSGTDMLSDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSGRTPLDLAA
FKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQNAVDIQ
DGNGQTPLMLSVLNGHTDCVYSLLNKGANVDAKDKWGRTALHRGAVTGHEECVDALLQ
HGAKCLLRDSRGRTPIHLSAACGHIGVLGALLQSAASMDANPATA"
BASE COUNT 730 a 487 c 580 g 676 t
ORIGIN
1 gctgtgctgt tcagagaatg tttgtaagtg ttgtacagaa gaggaggaaa aactacttgt
61 gctcttccaa ctgtgacttt tatcacatag cttggaattt agtgttttaa aagatcgaat
121 gagtcgagtg tgtattgttg ttttggagga ggtagaagat gaatctcctg cattcatttc
181 taaattgcca caggaaaata aatccctaca ttctccacct tctggaaatg tattggtaag
241 atatccatca ctggtgcaag ctatatttaa cggagatcct gatgaagttc gagcactaat
301 atttaagaaa gaagatgtta actttcagga caatgaaaag cgaaccccat tgcacgccgc
361 agcttacctt ggagatgcag aaatcattga acttcttatt ttatctggag ctagagttaa
421 tgccaaagac agcaaatggt tgacaccttt acacagagca gttgcatctt gtagtgagga
481 agcagttcag gtacttttga agcattctgc agatgttaat gctcgagaca aaaattggca
541 aaccccttta catatagctg ctgctaataa agctgtaaag tgtgctgaag ctttggtacc
601 tcttctgagt aatgtaaacg tatctgatcg agcagggagg actgcattac atcatgcagc
661 tttcagtgga catggtgaga tggtcaaact actcttgtct agaggtgcca atattaatgc
721 ttttgacaag aaagataggc gtgctatcca ttgggcagca tatatgggtc acattgaagt
781 agtgaaattg cttgtgtcgc atggagctga agtgacatgc aaggataaaa agtcttatac
841 acctcttcat gcagcagcct ctagtggaat gatcagcgta gtcaagtacc ttctagatct
901 tggagttgat atgaatgaac caaatgccta tggaaataca cctcttcatg tagcctgcta
961 taatggacaa gatgttgtag tgaatgaact tatagactgt ggtgctattg tgaatcaaaa
1021 gaatgaaaaa ggatttactc ctttgcactt tgctgctgca tcaacacatg gagcattgtg
1081 tttagagctt ctagttggca atggggccga tgtcaatatg aagagtaaag atgggaaaac
1141 cccactacac atgactgctc tccacggtag attctcccga tcacaaacca ttatccagag
1201 tggagctgta atcgactgtg aggataagaa tggaaatacc cctttgcaca tagcagcacg
1261 gtatggccat gagctgctga tcaacactct tattacaagt ggtgctgaca ctgcaaagcg
1321 tggcatacat ggaatgttcc ccctccattt ggcagcctta agcggctttt cagattgctg
1381 cagaaaactt ctttcttcag gatttgatat agatacccca gatgattttg gcaggacttg
1441 tctacatgca gctgcagctg gagggaattt ggagtgccta aaccttctgc tgaatactgg
1501 tgcagacttt aataaaaagg acaaatttgg gagatctcca ctgcactacg ctgctgccaa
1561 ctgcaattac cagtgcctgt ttgctcttgt gggatcagga gcaagtgtga atgaccttga
1621 tgaaagaggc tgcacacccc tgcactatgc agctacatca gacacagatg gcaagtgcct
1681 ggaatactta ttaagaaacg atgcaaatcc agggatccgt gataagcaag gatacaacgc
1741 agttcattat tcagctgctt atggtcaccg tctatgtctt cagctgattg caagtgaaac
1801 tcctctagat gttttaatgg aaacctcagg aacagacatg ctgagtgatt cagataatag
1861 agcaacaata agccctttac acttggctgc ctatcatggt caccatcaag cactggaagt
1921 gttggtacag tctttgttag atcttgatgt cagaaatagt agtggaagaa cacccctaga
1981 tcttgcagct tttaagggcc atgttgaatg tgtggatgta ctcattaatc agggagcctc
2041 aatcttagta aaagattaca ttttgaagag gacacctatt catgcagcag caacaaatgg
2101 tcattcagaa tgcttacggc tattaatagg aaatgcagaa ccacagaatg cagtggatat
2161 tcaagatgga aatggacaga cgcctctgat gctatctgtt ctcaacgggc acacagactg
2221 tgtttactca ttgctgaaca aaggagcaaa tgtagatgcc aaagataagt ggggaaggac
2281 agcgttgcat agaggggcag ttacaggcca tgaagaatgt gtagatgcat tacttcaaca
2341 tggtgctaag tgcttacttc gggatagcag gggccggacg cctatacacc tgtctgctgc
2401 ctgtggacac attggtgttc ttggagccct tttgcagtca gcagcatcta tggatgcaaa
2461 tccagccaca gca
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