LOCUS BC106706 710 bp mRNA linear HUM 12-OCT-2006 DEFINITION Homo sapiens programmed cell death 6, mRNA (cDNA clone MGC:119050 IMAGE:40003290), complete cds. ACCESSION BC106706 VERSION BC106706.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 710) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 710) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 4, 2006 this sequence version replaced BC106706.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 8 Row: c Column: 13. FEATURES Location/Qualifiers source 1..710 /db_xref="H-InvDB:HIT000338449" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:119050 IMAGE:40003290" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: AACCCAAA sequenced from the reverse primer" gene 1..710 /gene="PDCD6" /gene_synonym="ALG-2" /gene_synonym="MGC9123" /gene_synonym="PEF1B" /db_xref="GeneID:10016" /db_xref="HGNC:HGNC:8765" /db_xref="MIM:601057" CDS 50..625 /gene="PDCD6" /gene_synonym="ALG-2" /gene_synonym="MGC9123" /gene_synonym="PEF1B" /codon_start=1 /product="programmed cell death 6" /protein_id="AAI06707.1" /db_xref="GeneID:10016" /db_xref="HGNC:HGNC:8765" /db_xref="MIM:601057" /translation="MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVIS DTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTY DRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQR LTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV" BASE COUNT 155 a 203 c 207 g 145 t ORIGIN 1 aggtctctcg tcgctgcagg cgcctcagcc cagccgcgtg ccttggccca tggccgccta 61 ctcttaccgc cccggccctg gggccggccc tgggcctgct gcaggcgcgg cgctgccgga 121 ccagagcttc ctgtggaacg ttttccagag ggtcgataaa gacaggagtg gagtgatatc 181 agacaccgag cttcagcaag ctctctccaa cggcacgtgg actcccttta atccagtgac 241 tgtcaggtcg atcatatcca tgtttgaccg tgagaacaag gccggcgtga acttcagcga 301 gttcacgggt gtgtggaagt acatcacgga ctggcagaac gtcttccgca cgtacgaccg 361 ggacaactcc gggatgatcg ataagaacga gctgaagcag gccctctcag gtttcggcta 421 ccggctctct gaccagttcc acgacatcct cattcgaaag tttgacaggc agggacgggg 481 gcagatcgcc ttcgacgact tcatccaggg ctgcatcgtc ctgcagaggt tgacggatat 541 attcagacgt tacgacacgg atcaggacgg ctggattcag gtgtcgtacg aacagtacct 601 gtccatggtc ttcagtatcg tatgaccctg gcctctcgtg aagagcagca caacatggaa 661 agagccaaaa tgtcacagtt cctatctgtg agggaatgga gcacaggtgc //