LOCUS BC106077 1519 bp mRNA linear HUM 24-MAR-2009
DEFINITION Homo sapiens T cell receptor delta variable 2, mRNA (cDNA clone
IMAGE:6180219).
ACCESSION BC106077
VERSION BC106077.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1519)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1519)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: h Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1519
/db_xref="H-InvDB:HIT000338438"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6180219"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 420 a 373 c 347 g 379 t
ORIGIN
1 ggaacctgag actaggggac agaaagacta gggattcacc cagtaaagag agctcatctg
61 tgactgagga gccttgctcc atttcaggtc ttctgtgatt tcaataagga agaagaatgg
121 aaactctcct gggagtgtct ttggtgattc tatggcttca actggctagg gtgaacagtc
181 aacagggaga agaggatcct caggccttga gcatccagga gggtgaaaat gccaccatga
241 actgcagtta caaaactagt ataaacaatt tacagtggta tagacaaaat tcaggtagag
301 gccttgtcca cctaatttta atacgttcaa atgaaagaga gaaacacagt ggaagattaa
361 gagtcacgct tgacacttcc aagaaaagca gttccttgtt gatcacggct tcccgggcag
421 cagacactgc ttcttacttc tgtgctacgg acgcttcgga acggggagga ggaaacaaac
481 tcacctttgg gacaggcact caactaaaag tggaactcaa tatccagaac cctgaccctg
541 ccgtgtacca gctgagagac tctaaatcca gtgacaagtc tgtctgccta ttcaccgatt
601 ttgattctca aacaaatgtg tcacaaagta aggattctga tgtgtatatc acagacaaaa
661 ctgtgctaga catgaggtct atggacttca agagcaacag tgctgtggcc tggagcaaca
721 aatctgactt tgcatgtgca aacgccttca acaacagcat tattccagaa gacaccttct
781 tccccagccc agaaagttcc tgtgatgtca agctggtcga gaaaagcttt gaaacagata
841 cgaacctaaa ctttcaaaac ctgtcagtga ttgggttccg aatcctcctc ctgaaagtgg
901 ccgggtttaa tctgctcatg acgctgcggc tgtggtccag ctgagatctg caagattgta
961 agacagcctg tgctccctcg ctccttcctc tgcattgccc ctcttctccc tctccaaaca
1021 gagggaactc tcctaccccc aaggaggtga aagctgctac cacctctgtg cccccccggc
1081 aatgccacca actggatcct acacgaattt atgattaaga ttgctgaaga gctgccaaac
1141 actgctgcca ccccctctgt tcccttattg ctgcttgtca ctgcctgaca ttcacggcag
1201 aggcaaggct gctgcagcct cccctggctg tgcacattcc ctcctgctcc ccagagactg
1261 cctccgccat cccacagatg atggatcttc agtgggttct cttgggctct aggtcccgga
1321 gaatgttgtg aggggtttat ttttttttaa tagtgttcat aaagaaagac atagtattct
1381 tcttctcaag acgtgggggg aaattatctc attatcgagg ccctgctatg ctgtgtgtct
1441 gggcgtgttg tatgtcctgc tgccgatgcc ttcattaaaa tgatttggaa gagcaaaaaa
1501 aaaaaaaaaa aaaaaaaaa
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