LOCUS BC106053 3357 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens MAP7 domain containing 1, mRNA (cDNA clone MGC:117315
IMAGE:6514558), complete cds.
ACCESSION BC106053
VERSION BC106053.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361780.
FEATURES Location/Qualifiers
source 1..3357
/db_xref="H-InvDB:HIT000338414"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117315 IMAGE:6514558"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3357
/gene="MAP7D1"
/db_xref="GeneID:55700"
/db_xref="HGNC:HGNC:25514"
CDS 217..2742
/gene="MAP7D1"
/codon_start=1
/product="MAP7 domain containing 1"
/protein_id="AAI06054.1"
/db_xref="GeneID:55700"
/db_xref="HGNC:HGNC:25514"
/translation="MESGPRAELGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALV
PDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMG
PRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVW
LEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRS
VKKTWAEIRQQRWSWAGALHHSSPGHKTSGSRCSVSAVNLPKHVDSIINKRLSKSSAT
LWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQGRGCDPGRGP
TWGRAGASLARGPQPDRTHPSAAVPVCPRSASASPLTPCSVTRSVHRCAPAGERGERR
KPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRAR
LSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRV
RRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAE
TPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQ
AERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEAR
SREEAERQRLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANG
SSPEPVKAVEARSPGLQKEAVQKEEPIPQEPQWSLPSKELPASLVNGLQPLPAHQENG
FSTNGPSGDKSLSRTPETLLPFAEAEAFLKKAVVQSPQVTEVL"
BASE COUNT 759 a 1112 c 1056 g 430 t
ORIGIN
1 gggttcgcga ccgcagccga gagaccccgg gcgaccggca cctccgagac tcgcgggcca
61 cctgcctcga ccttccccgg agcgcccccg cctccgagtc gctacttgcc gggccgggcc
121 gggccgggcg tgatgcgccg cgggacccct gtcctggcca ctggccgccg ccgccgccgc
181 cgctgagacc ccgagacccc cagtgacgcc gcagccatgg agagcggccc gcgtgcggag
241 ctgggggcgg gcgcaccccc agctgtggtc gccaggaccc ccccagagcc aagaccttct
301 ccagaaggtg acccttcccc cccaccacca ccaatgtcag ccctggtccc cgacactccc
361 ccggacaccc ctcctgccat gaagaatgcc actagctcta agcagctccc actggaacca
421 gagagcccct cagggcaggt cgggcctagg ccagcccccc cgcaggaaga gtccccttcc
481 tctgaagcaa agagcagagg acccacccca ccagccatgg gcccacggga tgccagacct
541 cctcgaagga gcagccagcc atctccaaca gcagtgccag cctccgacag ccctcccacc
601 aagcaagagg tgaagaaggc aggagagaga cacaagctgg caaaggagcg gcgagaagag
661 cgggccaagt acctggcggc caagaaggca gtgtggctgg agaaggagga gaaggccaag
721 gcgctgcggg agaagcagct ccaggagcgc cggcgccggc tggaggagca acgtcttaaa
781 gccgagcaac gccgtgcagc cctggaggaa cggcagcggc agaagctcga gaaaaacaag
841 gagcgctatg aagcagccat ccaacggtca gtgaagaaga cgtgggccga aatccggcag
901 cagcgctggt cctgggcagg ggccctgcac cacagctctc caggacataa gaccagtggg
961 agcaggtgct ccgtgtcggc agttaacctg cccaaacacg tggactctat aatcaacaag
1021 cggctctcaa agtcctctgc cacgctctgg aactccccca gtagaaatcg cagcctgcag
1081 ctgagcgcat gggagagcag catcgtggat cgtctgatga cgcccactct ctccttcctt
1141 gctcggagtc gcagcgcggt cacactgccc cgcaacggcc gggaccaggg taggggctgc
1201 gaccctggga gaggccccac gtggggccgg gcaggggcca gcctggcgcg cgggccgcaa
1261 cccgaccgca ctcatccctc tgcagccgtg ccggtgtgcc cgcgctcggc ctccgccagc
1321 cccctgacgc cgtgcagcgt cacccgaagc gtgcaccgct gcgcccccgc cggtgagcgc
1381 ggggagcgcc gcaagcccaa cgccgggggc agccccgctc cggtgcgccg ccggccggag
1441 gcctcgccgg tgcagaaaaa ggagaagaag gacaaggagc gggaaaacga gaaggagaag
1501 agtgccctag cccgggagcg cagcctcaag aagcgccagt cgctgcccgc ctccccacgt
1561 gcccgcctct ccgccagcac cgcctctgag ctcagcccca aatccaaggc caggccatcc
1621 tctccctcca catcctggca caggcctgcc tccccctgcc ccagcccagg gccaggccac
1681 actctgcctc caaagccacc gtccccccga ggcaccactg catcccccaa ggggcgggtt
1741 cggaggaagg aggaggcaaa ggagagcccc agcgccgcag ggcccgagga caagagccag
1801 agcaagcgca gggccagtaa cgagaaggag tcagcagccc cagcctcacc ggcaccttcg
1861 ccggcgccct cgcccacccc agccccgccc cagaaggagc agccccccgc ggagacccct
1921 acagacgctg ctgtcttgac ctcaccccca gcccctgctc ccccggtgac ccctagcaaa
1981 ccaatggccg gcaccacaga ccgagaagaa gccactcggc tcttggctga gaagcggcgc
2041 caggcccggg agcagcggga gcgcgaggag caggagcgga ggctgcaggc agaaagggac
2101 aagcgaatgc gagaggagca gctggcacgg gaggccgagg cccgggcgga gcgggaggcg
2161 gaggcccgga ggcgggagga gcaggaggca cgagagaagg cgcaggccga gcaggaggag
2221 caggagcggc tgcagaagca gaaagaggag gccgaagctc ggtcgcggga agaggcggag
2281 cggcagcgtc tggagcggga aaagcacttc cagcagcagg agcaagagcg gcaagagcgc
2341 agaaagcgtc tggaggagat catgaagagg actcggaagt cagaagtttc tgaaaccaag
2401 cagaagcagg acagcaagga ggccaacgcc aacggttcca gcccagagcc tgtgaaagct
2461 gtggaggctc ggtccccagg gctgcagaag gaggctgtgc agaaagagga gcccatccca
2521 caggagcctc agtggagtct cccaagcaag gagttgccag cgtccctggt gaatggcctg
2581 cagcctctcc cagcacacca ggagaatggc ttctccacca acggaccctc tggggacaag
2641 agtctgagcc gaacaccaga gacactcctg ccctttgcag aggcagaagc cttcctcaag
2701 aaagctgtgg tgcagtcccc gcaggtcaca gaagtccttt aagagggttt gccttggatc
2761 cgggcacagt tgtgagggct cctctgcatc acctaccagg atgtctggag gagaaaaaga
2821 cagaacaaag atggaagtgg cctgggcccc tgggggtggg tcctctctgt tgtttttaat
2881 ctgcacctta tagactgatg tctctttggc cggagccaga tctgcccctc agtgcattcg
2941 tgtgctcgca cgcgcagaca tcccttctcc cccatacaca catatacact cacagcctct
3001 ctggcctctt cccttgggga ggggccacct gtagtatttg ccttgatttg gtggggtaca
3061 gtggatgtga atactgtaaa tagcttgtgc tcagactcct ctgcgtggag agggtgggtg
3121 caggaggcag accctccccc caaagccccc tggggagatc ttcctctctc tatttaactg
3181 taactgaggg ggatcccagg tctggggatg ggggacacct tgggccacag gatactggtt
3241 gcttcagggg tacccatgcc ccctgccctc gcctggaatc agtgttactg catctgatta
3301 aatgtctcca gaaataaaga ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//