LOCUS BC106008 2205 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA
clone MGC:110997 IMAGE:6156823), complete cds.
ACCESSION BC106008
VERSION BC106008.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14141150.
FEATURES Location/Qualifiers
source 1..2205
/db_xref="H-InvDB:HIT000338374"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:110997 IMAGE:6156823"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2205
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/db_xref="GeneID:3185"
/db_xref="HGNC:HGNC:5039"
/db_xref="IMGT/GENE-DB:5039"
/db_xref="MIM:601037"
CDS 293..1540
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/codon_start=1
/product="HNRPF protein"
/protein_id="AAI06009.1"
/db_xref="GeneID:3185"
/db_xref="HGNC:HGNC:5039"
/db_xref="IMGT/GENE-DB:5039"
/db_xref="MIM:601037"
/translation="MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVH
FIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP
NSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFA
SQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARR
YIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRY
GDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVE
FATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGL
ESQSVSGCYGAGYSGQNSMGGYD"
BASE COUNT 608 a 473 c 569 g 555 t
ORIGIN
1 ccggaccccg cgcctcctcg gggccgacgg gccagtccct ggcgtggttg agaacaaaaa
61 catgcacctg gagtttcccc ggagccctct gcgtggttga gcttcggtgg aatttcgggg
121 ctcttggctg ccagccgcgc ttgcctggta gcaacagaaa ccagtcctgc tcgcctccgt
181 ggacatttca ttaccatcca gaagtgtctc ccactgaagg catccgtggt tgtttttaag
241 ccacaaaaaa gccacaccca agatcacctg acacccaccc tgtcaagtgt ccatgatgct
301 gggccctgag ggaggtgaag gctttgtggt caagctccgt ggcctgccct ggtcctgctc
361 tgttgaggac gtgcagaact tcctctctga ctgcacgatt catgatgggg ccgcaggtgt
421 ccatttcatc tacactagag agggcaggca gagtggtgag gcttttgttg aacttggatc
481 agaagatgat gtaaaaatgg ccctgaaaaa agacagggaa agcatgggac accggtacat
541 tgaggtgttc aagtcccaca gaaccgagat ggattgggtg ttgaagcaca gtggtcccaa
601 cagtgccgac agcgccaacg atggcttcgt gcggcttcga ggactcccat ttggatgcac
661 aaaggaagaa attgttcagt tcttctcagg gttggaaatt gtgccaaacg ggatcacatt
721 gcctgtggac cccgaaggca agattacagg ggaagcgttc gtgcagtttg cctcgcagga
781 gttagctgag aaggctctag ggaaacacaa ggagaggata gggcacaggt acattgaggt
841 gtttaagagc agccaggagg aagttaggtc atactcagat ccccctctga agttcatgtc
901 cgtgcagcgg ccagggccct atgaccggcc cgggactgcc aggaggtaca ttggcatcgt
961 gaagcaggca ggcctggaaa ggatgaggcc tggtgcctac agcacaggct acgggggcta
1021 cgaggagtac agtggcctca gtgatggcta cggcttcacc accgacctgt tcgggagaga
1081 cctcagctac tgtctctccg gaatgtatga ccacagatac ggcgacagtg agttcacagt
1141 gcagagcacc acaggccact gtgtccacat gaggggcctg ccgtacaaag cgaccgagaa
1201 cgacatttac aacttcttct ctcctctcaa ccctgtgaga gtccatattg agattggccc
1261 agatggaaga gtgacgggtg aagcagatgt tgagtttgct actcatgaag aagctgtggc
1321 agctatgtcc aaagacaggg ccaatatgca gcacagatat atagaactct tcttgaattc
1381 aacaacaggg gccagcaatg gggcgtatag cagccaggtg atgcaaggca tgggggtgtc
1441 tgctgcccag gccacttaca gtggcctgga gagccagtca gtgagtggct gttacggggc
1501 cggctacagt gggcagaaca gcatgggtgg ctatgactag ttttgttagg aacatttgag
1561 ttacttcaat cattttcaca ggcagccaac aagcaattaa gagcagttat aatagaggaa
1621 gctgggggac ccattttgca ccatgagttt gtgaaaaatc tggattaaaa aattacctct
1681 tcagtgtttt ctcatgcaaa attttcttct agcatgtgat aatgagtaaa ctaaaactat
1741 tttcagcttt tctcaattaa cattttggta gtatacttca gagtgatgtt atctaagttt
1801 aagtagttta agtatgttaa atgtggatct tttacaccac atcacagtga acacactggg
1861 gagacgtgct tttttggaaa actcaaaggt gctagctccc tgattcaaag aaatatttct
1921 catgtttgtt cattctagtt tatattttca tttaaaatcc tttaggttaa gtttaagctt
1981 tttaaaagtt agttttgaga attgagacac aatactaata ctgtaggaat tggtgaggcc
2041 ttgacttaaa actttctttg tactgtgatt tccttttggg tgtattttgc taagtgaaac
2101 ttgttaaatt ttttgttaac taaatttttt tcttaaaata aagacttttt cacaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//