LOCUS BC105934 4609 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens SAPS domain family, member 3, mRNA (cDNA clone
MGC:125711 IMAGE:40029058), complete cds.
ACCESSION BC105934
VERSION BC105934.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4609)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4609)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 12 Row: b Column: 8.
FEATURES Location/Qualifiers
source 1..4609
/db_xref="H-InvDB:HIT000338306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:125711 IMAGE:40029058"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert"
gene 1..4609
/gene="SAPS3"
/gene_synonym="FLJ11058"
/gene_synonym="SAP190"
/gene_synonym="SAPL"
/gene_synonym="SAPLa"
/db_xref="GeneID:55291"
/db_xref="HGNC:HGNC:1173"
/db_xref="IMGT/GENE-DB:1173"
/db_xref="MIM:1173"
CDS 136..2757
/gene="SAPS3"
/gene_synonym="FLJ11058"
/gene_synonym="SAP190"
/gene_synonym="SAPL"
/gene_synonym="SAPLa"
/codon_start=1
/product="SAPS3 protein"
/protein_id="AAI05935.1"
/db_xref="GeneID:55291"
/db_xref="HGNC:HGNC:1173"
/db_xref="IMGT/GENE-DB:1173"
/db_xref="MIM:1173"
/translation="MFWKFDLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKL
IEFLLKAECLEDLVSFIIEEPPQDMDEKIRYKYPNISCELLTSDVSQMNDRLGEDESL
LMKLYSFLLNDSPLNPLLASFFSKVLSILISRKPEQIVDFLKKKHDFVDLIIKHIGTS
AIMDLLLRLLTCIEPPQPRQDVLNWLNEEKIIQRLVEIVHPSQEEDRHSNASQSLCEI
VRLSRDQMLQIQNSTEPDPLLATLEKQEIIEQLLSNIFHKEKNESAIVSAIQILLTLL
ETRRPTFEGHIEICPPGMSHSACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMKTTWG
VLDPPVGNTRLNVIRLISSLLQTNTSSINGDLMELNSIGVILNMFFKYTWNNFLHTQV
EICIALILASPFENTENATITDQDSTGDNLLLKHLFQKCQLIERILEAWEMNEKKQAE
GGRRHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKDLPDEVRERWETFCTSSLGETN
KRNTVDLVTTCHIHSSSDDEIDFKETGFSQDSSLQQAFSDYQMQQMTSNFIDQFGFND
EKFADQDDIGNVSFDRVSDINFTLNTNESGNIALFEACCKERIQQFDDGGSDEEDIWE
EKHIAFTPESQRRSSSGSTDSEESTDSEEEDGAKQDLFEPSSANTEDKMEVDLSEPPN
WSANFDVPMETTHGAPLDSVGSDVWSTEEPMPTKETGWASFSEFTSSLSTKDSLRSNS
PVEMETSTEPMDPLTPSAAALAVQPEAAGSVAMEASSDGEEDAESTDKVTETVMNGGM
KETLSLTVDAKTETAVFKSEEGKLSTSQDAACKDAEECPETAEAKCAAPRPPSSSPEQ
RTGQPSAPGDTSVNGPV"
BASE COUNT 1401 a 908 c 1006 g 1294 t
ORIGIN
1 tcccactgta ttcctgctaa tctgctaatg cagtaaattg gaggaaaact gttaccagga
61 taacctgtaa tgggcaagga gccacaaaga agaaaacatt tcttttaatt tttaaacttg
121 gtttgaaaga ccagcatgtt ttggaaattt gatcttcact catcatccca catagacaca
181 cttctagaaa gagaagatgt aacactgaag gagttaatgg atgaggaaga tgttttacag
241 gaatgtaaag ctcagaaccg caaacttata gagtttctgt taaaagcaga atgtctcgaa
301 gatttagtct cattcattat agaagaacca cctcaagaca tggatgaaaa gatcagatac
361 aagtatccaa atatatcttg tgagttgctc acttctgatg tctcccagat gaatgataga
421 ctgggagaag atgaatcctt gctaatgaaa ttatatagct tcctcctaaa cgattcccct
481 ttgaatccac tacttgccag tttcttcagc aaggtgctaa gtattcttat cagcagaaaa
541 ccagaacaga ttgtggattt cttaaagaag aagcatgatt ttgtagacct tattataaag
601 cacataggaa cttctgctat catggatttg ttgctcaggc tcctgacgtg tatcgaacct
661 ccacagccca ggcaagatgt gctgaattgg ttaaatgagg agaaaattat ccagaggctt
721 gtggaaatag ttcatccatc gcaagaagaa gatcgacatt caaatgcatc acaatcactt
781 tgtgaaattg ttcgcctgag cagagaccag atgttacaaa ttcagaacag tacagagccc
841 gaccccctgc ttgccactct agaaaagcaa gaaattatag agcagcttct atcaaatatt
901 ttccacaagg agaaaaatga gtcagccata gtcagtgcaa tccagatatt gctgacttta
961 cttgagacac gacgaccaac atttgaaggc catatagaga tctgcccacc aggcatgagc
1021 cattcagctt gttcagtaaa caagagtgtt ctagaagcca tcagaggaag acttggatct
1081 tttcatgaac tcctgctgga gccacccaag aaaagtgtga tgaagaccac atggggtgtg
1141 ctggatcctc ctgtggggaa tacccggttg aatgtcatta ggttgatatc cagcctgctt
1201 caaaccaata ccagcagtat aaatggggac cttatggagc tgaatagcat tggagtcata
1261 ttgaacatgt tcttcaagta tacatggaat aactttttgc atacacaagt ggaaatttgt
1321 attgcactga ttcttgcaag tccttttgaa aacacagaaa atgccacaat taccgatcaa
1381 gactccactg gtgataattt gttattaaaa catcttttcc aaaaatgtca attaatagaa
1441 cgaatacttg aagcctggga aatgaatgag aagaaacagg ctgagggagg aagacggcat
1501 ggttacatgg gacacctaac gaggatagct aactgtatcg tgcacagcac tgacaagggc
1561 cccaacagtg cattagtgca gcagcttatc aaagatcttc ccgacgaagt cagggaacga
1621 tgggagacgt tctgcacaag ctccttagga gaaactaaca agaggaacac ggtagatcta
1681 gttacaacct gccatattca ttcatccagt gatgatgaaa ttgactttaa agaaacgggt
1741 ttctcacagg attcttcttt gcagcaagcc ttttctgatt atcagatgca acaaatgacg
1801 tccaatttta ttgaccagtt tggcttcaac gatgagaagt ttgcagatca agatgacatt
1861 ggcaatgttt cttttgatcg agtatcagac atcaacttta ctctcaatac aaatgaaagt
1921 ggaaatattg ccttgtttga agcatgttgt aaggaaagaa tacaacagtt tgatgatggt
1981 ggctctgatg aggaagatat atgggaggaa aagcacatcg cattcacacc agaatcccaa
2041 agacgatcca gctcggggag tacagacagt gaggaaagta cagactctga agaagaagat
2101 ggagcaaagc aagacttgtt tgaacccagc agtgccaaca cggaggataa aatggaggtg
2161 gacctgagtg aaccacccaa ctggtcagct aactttgatg tcccaatgga aacaacccac
2221 ggtgctccat tggattctgt gggatctgat gtctggagca cagaggagcc gatgccaact
2281 aaagagacgg gctgggcttc tttttcagag ttcacgtctt ccctgagcac aaaagattct
2341 ttaaggagta attctccagt ggaaatggaa accagcactg aacccatgga ccctctgact
2401 cccagtgcgg ctgccctggc agtgcagcca gaagcggcag gcagtgtggc catggaagcc
2461 agctctgacg gagaggagga tgcagaaagt acagacaagg taactgagac agtgatgaat
2521 ggcggcatga aggaaacgct cagcctcact gtagatgcca agacagagac tgcggtcttc
2581 aaaagtgagg aagggaaact gtctacctct caagatgctg cttgtaaaga cgcagaggag
2641 tgtcccgaga ctgcagaggc gaagtgcgcg gcgcccaggc ctcccagcag cagtcccgag
2701 cagaggactg gccaaccaag cgcaccaggt gacacttcag tgaatggccc tgtatgacgg
2761 gtgacgtctg ctgctgctga ctgaggactg cagaccgcca ccactcaggg gctctggagg
2821 ggtcagctgg agcccaccaa gctgtcactg ctgcactcac tctgcaaggg atcaggacca
2881 gcaaccttta tattctagat tctaagacat tgtacagaga aattcagaag tgtaaaaata
2941 ttgcacattg acaaatacca agaatttttg cgtatgttta tattgtattg ttctaaataa
3001 tgggtagcct gtgaaataag atcttgccac ccatgtaata atagtagtaa tactatagtt
3061 aaaatggctg taagaatagt tttataaaag tgaatacaca gatctattgt atttgaaaca
3121 taactttgac aattattagt gtgaccaaag tattaggcgg ttttcataca tttttcacct
3181 tgtacaaaat tatgaattca tttttcctcc aggccgacaa ggagttgtag aatgaaaatg
3241 ccctctaagt gttattttgg ttgttctaac ttacaaaagt gattttgaat aagaaatatt
3301 tggtgttctt tttataacca gtttttgatt ggtaattgtt ttctgtattg tttaaaacgg
3361 atcaaaaatg taagtctatt ggtagagatt aagtaaagta tttattgcta catcatagtt
3421 gataaattga tgttatcgta aagccatatg ttctgttcaa gtcttgtttg cttgaaatga
3481 ttattcctac aagtgaaaca ctagactatt tggagtgtat atggcttgtg ttttgggatt
3541 tttttttttt ttttggcttt tgtttttgtt tgtttttttg tttcatttgg tagttcatct
3601 gccttttaac ccattcacca aaatttacct tgttaacaag catcaccaat gaacatttca
3661 gagcaatctg catatttaac agacctaaaa taaatcctat taggcaagtc agttgaaaat
3721 gctcgtgctg ctaatggaat tagagtgcgt tcattttaca ggctagtatt ttaaaagtag
3781 aaatcaaaat ctggcaccga agcatgctaa ttgtttactg taccttgtga ggttttcact
3841 cataaattta aaccagtgta tttttttaga actggtttgt gtatatatat agtgattatg
3901 gatactaatt caatgtaatt tataattttc tatgtcaata caaaaataca tcacagcctt
3961 ctcaaacagc tcaagcaata tattgtatat tgccatatcg tctggtgaaa gggttaaatt
4021 acttcacctc ttgcactttt agatgcaaat cagtttttca tttctgtaat agaaaattat
4081 tcacgtattt ttacatcatt tgtttttcct gaccagtatt taaaaccaaa aggatattct
4141 gaaaaatggc caacaatttt tttagaagta gcatcccaag cagcgtgcct aaacattaca
4201 ttgcatatgg aaataaaaga atcaaacgtc taatgcctta ttatttctga tttccttttt
4261 cattttaagt ggtgtggaga ttccagcact cccaggacag tggagtcagc agtaagccct
4321 gggacaggtg gcaagggtgg gtcccttgac ctttgcacgc ctcctcagga accccctttc
4381 ccgggtgagc ccctctctga agagactgtc cttgggcctc ctctggaagc agcaccccca
4441 gaggacaggg ctcctcctgc ttgcctcagg gctgcctgac ttgaatggcg ttggacctcg
4501 gggattactg gtagataata tgctctggtc tcgcctggtg gtgagttttg ccagccatgg
4561 ccagggtttg gctccactgg tggcacacgt ggcctccgtg gtatggacc
//