LOCUS BC105801 974 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens alkB, alkylation repair homolog 6 (E. coli), mRNA
(cDNA clone IMAGE:4081917), partial cds.
ACCESSION BC105801
VERSION BC105801.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 974)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: b Column: 22.
FEATURES Location/Qualifiers
source 1..974
/db_xref="H-InvDB:HIT000338282"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4081917"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..974
/gene="ALKBH6"
/gene_synonym="MGC15677"
/db_xref="GeneID:84964"
/db_xref="HGNC:HGNC:28243"
CDS <1..779
/gene="ALKBH6"
/gene_synonym="MGC15677"
/codon_start=3
/product="ALKBH6 protein"
/protein_id="AAI05802.1"
/db_xref="GeneID:84964"
/db_xref="HGNC:HGNC:28243"
/translation="GNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIY
YVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRY
VDKVSNLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTVLDFYEP
RRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSP
PNAAACPSARPGACLVRGTRVSLTIRRVPRVLRAGLLLGK"
BASE COUNT 207 a 313 c 279 g 175 t
ORIGIN
1 gggggaattt ggaaattgga ggggacgctg gtggacggat tgggtgcaag gagttggtgt
61 tgatggagga gcaggacgcc agagtcccag ccctggaacc gttcagagtg gagcaggcac
121 cacctgtaat ctactatgtc cctgacttca tctccaaaga agaggaggag tatttgcttc
181 gacaggtttt taatgcccca aagccaaagt ggacccagct ctctgggaga aagttacaga
241 actggggtgg gcttcctcat ccccgaggga tggttcctga gcggctgccc ccatggctcc
301 agcgctacgt ggacaaagtg tcaaacctca gcctctttgg aggcctccca gctaaccatg
361 tcctcgtgaa ccagtatctg cctggggagg gcatcatgcc ccacgaggac ggaccactgt
421 actacccgac tgtcagcacc atcagcctgg gctcccacac cgtgctggac ttctacgagc
481 cgcggcggcc agaggacgat gaccctacag aacagcctcg gcctccgccc cggcccacca
541 cctcgctact gctggaaccg cgcagcctgc tggtgctccg cggccccgcc tacacgcgtc
601 ttctccacgg catcgccgcc gcccgcgtag acgcgctgga cgccgcctcc tcgccgccca
661 atgcggcagc ctgcccgtcg gcgcggccgg gagcctgcct ggtgcgcggc acccgggtct
721 cgctgaccat ccgccgcgtg ccccgcgtgc tgcgcgccgg cctcctgctg ggcaagtgac
781 cgccagggcc gggacccctc ggattcccag gttcctgccc ctttggggct gctgtgactc
841 cgcgacctag gaaccgtggg caaagggggc tcccctgggt tatttatttt cccaataatt
901 ttgtgtgagc tacagaagac cccataccaa ataaacaaaa aaatcataaa aaaaaaaaaa
961 aaaaaaaaaa aaaa
//