LOCUS BC105585 890 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens SNW domain containing 1, mRNA (cDNA clone
IMAGE:6738734), partial cds.
ACCESSION BC105585
VERSION BC105585.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18860912.
FEATURES Location/Qualifiers
source 1..890
/db_xref="H-InvDB:HIT000386399"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6738734"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_141"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>890
/gene="SNW1"
/gene_synonym="Bx42"
/gene_synonym="NCOA-62"
/gene_synonym="Prp45"
/gene_synonym="PRPF45"
/gene_synonym="SKIP"
/db_xref="GeneID:22938"
/db_xref="HGNC:HGNC:16696"
/db_xref="MIM:603055"
CDS 26..>890
/gene="SNW1"
/gene_synonym="Bx42"
/gene_synonym="NCOA-62"
/gene_synonym="Prp45"
/gene_synonym="PRPF45"
/gene_synonym="SKIP"
/codon_start=1
/product="SNW1 protein"
/protein_id="AAI05586.1"
/db_xref="GeneID:22938"
/db_xref="HGNC:HGNC:16696"
/db_xref="MIM:603055"
/translation="MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPY
GYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDSEGKIKYDAIA
RQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVA
AAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKI
PRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQ
TVHKKKKKKKKK"
BASE COUNT 305 a 191 c 213 g 181 t
ORIGIN
1 ggggggctgg aagaagcgga agaagatggc gctcaccagc tttttacctg cacctactca
61 gctatctcag gaccagcttg aggctgaaga aaaggcaaga tcccagagat cacggcagac
121 ctcactggtc tcctcccgaa gagaacctcc cccgtacgga taccggaaag gctggatacc
181 tcggttatta gaggattttg gagatggagg tgcttttcca gagatccatg tggcccagta
241 tccactggat atgggacgaa agaaaaaaat gtcgaatgcg ctggccattc aggtggattc
301 tgaaggaaaa attaaatatg atgcaattgc tcgacaagga cagtcaaaag acaaggtcat
361 ttatagcaaa tacactgacc tggttccaaa ggaggttatg aatgcagatg atccagacct
421 gcaaaggccc gatgaagaag ctattaaaga gataacagaa aagacaagag tagccttaga
481 aaaatctgta tcacagaagg tcgccgcagc catgccagtt cgagcagctg acaaattggc
541 tcctgctcag tatatccgat acacaccatc tcagcaagga gtggcattca actctggagc
601 taaacagagg gttattcgga tggtagaaat gcagaaagat ccaatggagc ctccaaggtt
661 caagattaat aagaaaattc cccggggacc accttctcct cctgcgcctg tcatgcattc
721 tcctagccga aagatgactg taaaggaaca acaagagtgg aagattcctc cttgtatttc
781 taactggaaa aatgcaaagg gttatacaat tccattagac aaacgtctgg ctgctgatgg
841 aagaggacta cagacagtac acaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//