LOCUS BC105288 481 bp mRNA linear HUM 27-JAN-2006
DEFINITION Homo sapiens LSM12 homolog (S. cerevisiae), mRNA (cDNA clone
MGC:104211 IMAGE:6385345), complete cds.
ACCESSION BC105288
VERSION BC105288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 481)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 481)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748746.
FEATURES Location/Qualifiers
source 1..481
/db_xref="H-InvDB:HIT000338239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104211 IMAGE:6385345"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_141"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..481
/gene="LSM12"
/gene_synonym="FLJ30656"
/db_xref="GeneID:124801"
/db_xref="HGNC:HGNC:26407"
/db_xref="IMGT/GENE-DB:26407"
/db_xref="MIM:26407"
CDS 57..452
/gene="LSM12"
/gene_synonym="FLJ30656"
/codon_start=1
/product="LSM12 protein"
/protein_id="AAI05289.1"
/db_xref="GeneID:124801"
/db_xref="HGNC:HGNC:26407"
/db_xref="IMGT/GENE-DB:26407"
/db_xref="MIM:26407"
/translation="MAAPPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYQSKMLALISP
ECPSSSGKPNHADILLINLQYVSEVEIINDRTETPPPLASLNVSKLASKARTEKEEKL
SQAYAISAGVSLEGQQLFQTIHKTIKDCK"
BASE COUNT 139 a 131 c 120 g 91 t
ORIGIN
1 gggggctttc gcccgctgct gccgccgccg ccgccggccg cggctgcact cccaagatgg
61 cggctcctcc gggcgagtac ttcagcgttg ggagccaggt gtcgtgccgg acgtgccagg
121 agcagcggct gcagggcgag gtggtagcct ttgactacca atccaaaatg ctggctttaa
181 tctcaccaga atgtccctct tccagtggaa agcccaacca tgcagacatc ttgctcataa
241 acttacagta tgtttcagaa gtggaaataa ttaatgaccg aacagaaacc cctcctcccc
301 tagcttcact caatgttagt aagcttgcca gcaaagcacg gacagagaag gaggagaagc
361 tgagccaggc ctatgcaatc agtgctggtg tctctctaga gggccagcag ctcttccaga
421 ccattcacaa gaccattaaa gactgtaaat gacaaaaaaa aaaaaaaaaa aaaaaaaaaa
481 a
//